MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:117782707-117812723

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmc8	11	117782076 to 117793110	11034	+	protein coding gene	transmembrane channel-like gene family 8
Cpgi4214	11	117782969 to 117783652	683		CpG island	CpG island 4214
Gm11723	11	117783326 to 117785055	1729	-	antisense lncRNA gene	predicted gene 11723
Gm11724	11	117789897 to 117791313	1416	-	antisense lncRNA gene	predicted gene 11724
Cpgi4215	11	117789950 to 117790480	530		CpG island	CpG island 4215
Tssr106072	11	117790702 to 117790703	1	+	TSS region	transcription start site region 106072
Tssr106073	11	117790889 to 117790927	38	+	TSS region	transcription start site region 106073
Tssr106074	11	117792455 to 117792466	11	+	TSS region	transcription start site region 106074
Cpgi4216	11	117792479 to 117792828	349		CpG island	CpG island 4216
6030468B19Rik	11	117797660 to 117807301	9641	+	protein coding gene	RIKEN cDNA 6030468B19 gene
Tssr106075	11	117797707 to 117797723	16	+	TSS region	transcription start site region 106075
Tssr106076	11	117797726 to 117797748	22	+	TSS region	transcription start site region 106076
Tssr106077	11	117798392 to 117798422	30	+	TSS region	transcription start site region 106077
Cpgi4217	11	117809328 to 117810835	1507		CpG island	CpG island 4217
Tssr106078	11	117809653 to 117809685	32	+	TSS region	transcription start site region 106078
Gm20708	11	117809668 to 117839904	30236	+	protein coding gene	predicted gene 20708
Syngr2	11	117809668 to 117814283	4615	+	protein coding gene	synaptogyrin 2
Tssr106079	11	117809687 to 117809703	16	+	TSS region	transcription start site region 106079