Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:117499738-117779784

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr106062 11 117523526 to 117523544 18 + TSS region transcription start site region 106062
Gm11734 11 117523603 to 117532205 8602 + lincRNA gene predicted gene 11734
D11Dcr40 11 117573445 to 117573540 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 40
Gm35170 11 117594911 to 117639763 44852 - lncRNA gene predicted gene, 35170
2900041M22Rik 11 117611247 to 117613417 2170 + lncRNA gene RIKEN cDNA 2900041M22 gene
Tssr112028 11 117639738 to 117639784 46 - TSS region transcription start site region 112028
Cpgi4212 11 117653682 to 117656313 2631 CpG island CpG island 4212
Tssr106063 11 117654211 to 117654258 47 + TSS region transcription start site region 106063
Tnrc6c 11 117654289 to 117763439 109150 + protein coding gene trinucleotide repeat containing 6C
Tssr112029 11 117654549 to 117654552 3 - TSS region transcription start site region 112029
Tssr3743 11 117654721 to 117654741 20 + TSS region transcription start site region 3743
Tssr106064 11 117654798 to 117654824 26 + TSS region transcription start site region 106064
Tssr106065 11 117665503 to 117665514 11 + TSS region transcription start site region 106065
2610524J22Rik 11 117727740 to 117728128 388 unclassified gene RIKEN cDNA 2610524J22 gene
Tssr106066 11 117762215 to 117762220 5 + TSS region transcription start site region 106066
Tssr106067 11 117762439 to 117762458 19 + TSS region transcription start site region 106067
Tssr106068 11 117762498 to 117762513 15 + TSS region transcription start site region 106068
Tmc6 11 117765985 to 117782193 16208 - protein coding gene transmembrane channel-like gene family 6
Tssr112030 11 117774754 to 117774765 11 - TSS region transcription start site region 112030
Tssr112031 11 117775038 to 117775049 11 - TSS region transcription start site region 112031
Tssr112032 11 117778988 to 117779029 41 - TSS region transcription start site region 112032
Cpgi4213 11 117779564 to 117780908 1344 CpG island CpG island 4213
Tssr112033 11 117779605 to 117779631 26 - TSS region transcription start site region 112033