Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:117271486-117381517

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sept9 11 117199661 to 117362325 162664 + protein coding gene septin 9
Tssr106039 11 117277189 to 117277200 11 + TSS region transcription start site region 106039
Tssr106040 11 117277389 to 117277402 13 + TSS region transcription start site region 106040
Tssr106041 11 117308135 to 117308158 23 + TSS region transcription start site region 106041
Tssr106042 11 117308162 to 117308184 22 + TSS region transcription start site region 106042
Tssr106043 11 117308788 to 117308826 38 + TSS region transcription start site region 106043
Gm34065 11 117321925 to 117324935 3010 - lncRNA gene predicted gene, 34065
Tssr106044 11 117326386 to 117326398 12 + TSS region transcription start site region 106044
Tssr106045 11 117326405 to 117326477 72 + TSS region transcription start site region 106045
Tssr106046 11 117326486 to 117326517 31 + TSS region transcription start site region 106046
Tssr106047 11 117326639 to 117326661 22 + TSS region transcription start site region 106047
Cpgi4207 11 117327034 to 117327205 171 CpG island CpG island 4207
Tssr112024 11 117327053 to 117327062 9 - TSS region transcription start site region 112024
Tssr106048 11 117331532 to 117331564 32 + TSS region transcription start site region 106048
Tssr106049 11 117331696 to 117331712 16 + TSS region transcription start site region 106049
Tssr106050 11 117331719 to 117331739 20 + TSS region transcription start site region 106050
Cpgi4208 11 117332018 to 117332656 638 CpG island CpG island 4208
Tssr106051 11 117332194 to 117332210 16 + TSS region transcription start site region 106051
Tssr106052 11 117332277 to 117332284 7 + TSS region transcription start site region 106052
Tssr106053 11 117332303 to 117332328 25 + TSS region transcription start site region 106053
Tssr106054 11 117332335 to 117332348 13 + TSS region transcription start site region 106054
Tssr106055 11 117332379 to 117332388 9 + TSS region transcription start site region 106055
Tssr106056 11 117332398 to 117332401 3 + TSS region transcription start site region 106056
Tssr106057 11 117332410 to 117332454 44 + TSS region transcription start site region 106057
Tssr106058 11 117333478 to 117333488 10 + TSS region transcription start site region 106058
Tssr3742 11 117334163 to 117334185 22 - TSS region transcription start site region 3742
Tssr112025 11 117360476 to 117360492 16 - TSS region transcription start site region 112025
Tssr112026 11 117360553 to 117360566 13 - TSS region transcription start site region 112026
Tssr106059 11 117361261 to 117361277 16 + TSS region transcription start site region 106059
Tssr106060 11 117361305 to 117361329 24 + TSS region transcription start site region 106060