MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:11726444-11816457

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ikzf1	11	11685003 to 11772926	87923	+	protein coding gene	IKAROS family zinc finger 1
Tssr100382	11	11741843 to 11741858	15	+	TSS region	transcription start site region 100382
Tssr100383	11	11744127 to 11744130	3	+	TSS region	transcription start site region 100383
Tssr100384	11	11765077 to 11765082	5	+	TSS region	transcription start site region 100384
Cpgi2584	11	11769135 to 11769614	479		CpG island	CpG island 2584
Tssr100385	11	11769183 to 11769185	2	+	TSS region	transcription start site region 100385
Tssr100386	11	11769553 to 11769565	12	+	TSS region	transcription start site region 100386
Tssr106876	11	11769846 to 11769857	11	-	TSS region	transcription start site region 106876
Tssr106877	11	11769924 to 11769939	15	-	TSS region	transcription start site region 106877
Tssr100387	11	11771444 to 11771457	13	+	TSS region	transcription start site region 100387
Fignl1	11	11800288 to 11808995	8707	-	protein coding gene	fidgetin-like 1
Cpgi2585	11	11808544 to 11809397	853		CpG island	CpG island 2585
Tssr106878	11	11808923 to 11808967	44	-	TSS region	transcription start site region 106878
Tssr100388	11	11809074 to 11809088	14	+	TSS region	transcription start site region 100388
Tssr100389	11	11809090 to 11809103	13	+	TSS region	transcription start site region 100389
Tssr100390	11	11809519 to 11809526	7	+	TSS region	transcription start site region 100390
Tssr100391	11	11809805 to 11809808	3	+	TSS region	transcription start site region 100391
Ddc	11	11814101 to 11898144	84043	-	protein coding gene	dopa decarboxylase