Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116975168-117105180

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mgat5b 11 116918863 to 116986948 68085 + protein coding gene mannoside acetylglucosaminyltransferase 5, isoenzyme B
Cpgi4201 11 117028151 to 117028483 332 CpG island CpG island 4201
D11Dcr48 11 117030580 to 117030679 99 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 48
Gm11728 11 117035078 to 117040193 5115 - lincRNA gene predicted gene 11728
Tssr112011 11 117040168 to 117040180 12 - TSS region transcription start site region 112011
Tssr112012 11 117040182 to 117040200 18 - TSS region transcription start site region 112012
Tssr112013 11 117040226 to 117040235 9 - TSS region transcription start site region 112013
Tssr112014 11 117040315 to 117040325 10 - TSS region transcription start site region 112014
Gm11731 11 117058425 to 117060268 1843 + lincRNA gene predicted gene 11731
Cpgi4202 11 117076405 to 117077292 887 CpG island CpG island 4202
Tssr106011 11 117076767 to 117076840 73 + TSS region transcription start site region 106011
Snhg20 11 117076783 to 117078955 2172 + lincRNA gene small nucleolar RNA host gene 20
Tssr106012 11 117076841 to 117076852 11 + TSS region transcription start site region 106012
Tssr106013 11 117077172 to 117077205 33 + TSS region transcription start site region 106013
Tssr106014 11 117077239 to 117077245 6 + TSS region transcription start site region 106014
Gm26083 11 117077243 to 117077435 192 + snoRNA gene predicted gene, 26083
Mir6516 11 117077348 to 117077457 109 + miRNA gene microRNA 6516
Tssr112015 11 117078095 to 117078130 35 - TSS region transcription start site region 112015
Tssr112016 11 117078951 to 117078955 4 - TSS region transcription start site region 112016
Tssr112017 11 117083707 to 117083731 24 - TSS region transcription start site region 112017
Gm24323 11 117085836 to 117085912 76 + miRNA gene predicted gene, 24323
Tssr106015 11 117091989 to 117092000 11 + TSS region transcription start site region 106015
Gm11730 11 117094948 to 117097067 2119 - antisense lncRNA gene predicted gene 11730