Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:11694127-11794130

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ikzf1	11	11685003 to 11772926	87923	+	protein coding gene	IKAROS family zinc finger 1
BC028789	11	11692607 to 11694765	2158		unclassified gene	cDNA sequence BC028789
Tssr106873	11	11694269 to 11694284	15	-	TSS region	transcription start site region 106873
Gm12000	11	11695133 to 11696439	1306	-	antisense lncRNA gene	predicted gene 12000
Tssr106874	11	11699529 to 11699536	7	-	TSS region	transcription start site region 106874
Tssr3429	11	11699547 to 11699563	16	-	TSS region	transcription start site region 3429
Tssr100380	11	11701642 to 11701644	2	+	TSS region	transcription start site region 100380
Tssr100381	11	11719762 to 11719776	14	+	TSS region	transcription start site region 100381
Tssr106875	11	11725577 to 11725597	20	-	TSS region	transcription start site region 106875
Tssr100382	11	11741843 to 11741858	15	+	TSS region	transcription start site region 100382
Tssr100383	11	11744127 to 11744130	3	+	TSS region	transcription start site region 100383
Tssr100384	11	11765077 to 11765082	5	+	TSS region	transcription start site region 100384
Cpgi2584	11	11769135 to 11769614	479		CpG island	CpG island 2584
Tssr100385	11	11769183 to 11769185	2	+	TSS region	transcription start site region 100385
Tssr100386	11	11769553 to 11769565	12	+	TSS region	transcription start site region 100386
Tssr106876	11	11769846 to 11769857	11	-	TSS region	transcription start site region 106876
Tssr106877	11	11769924 to 11769939	15	-	TSS region	transcription start site region 106877
Tssr100387	11	11771444 to 11771457	13	+	TSS region	transcription start site region 100387