Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116772869-116842892

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St6galnac1 11 116765025 to 116775507 10482 - protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
Mxra7 11 116803400 to 116828068 24668 - protein coding gene matrix-remodelling associated 7
Tssr111980 11 116806977 to 116806981 4 - TSS region transcription start site region 111980
Tssr111981 11 116807144 to 116807153 9 - TSS region transcription start site region 111981
Tssr111982 11 116807650 to 116807661 11 - TSS region transcription start site region 111982
Tssr111983 11 116807680 to 116807758 78 - TSS region transcription start site region 111983
Tssr111984 11 116807769 to 116807781 12 - TSS region transcription start site region 111984
Tssr105994 11 116807869 to 116807892 23 + TSS region transcription start site region 105994
Tssr111985 11 116808157 to 116808162 5 - TSS region transcription start site region 111985
Tssr105995 11 116813221 to 116813238 17 + TSS region transcription start site region 105995
Tssr111986 11 116816213 to 116816247 34 - TSS region transcription start site region 111986
Cpgi4195 11 116827079 to 116828508 1429 CpG island CpG island 4195
Tssr111987 11 116828000 to 116828071 71 - TSS region transcription start site region 111987
Jmjd6 11 116837432 to 116843449 6017 - protein coding gene jumonji domain containing 6
Gm27401 11 116839794 to 116839966 172 - unclassified non-coding RNA gene predicted gene, 27401
Cpgi4196 11 116842464 to 116844100 1636 CpG island CpG island 4196
Tssr111988 11 116842726 to 116842743 17 - TSS region transcription start site region 111988
Tssr111989 11 116842819 to 116842828 9 - TSS region transcription start site region 111989
Tssr111990 11 116842831 to 116842846 15 - TSS region transcription start site region 111990
Tssr111991 11 116842848 to 116842869 21 - TSS region transcription start site region 111991
Tssr111992 11 116842875 to 116842893 18 - TSS region transcription start site region 111992