Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116657442-116697448

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prcd 11 116653889 to 116668389 14500 + protein coding gene photoreceptor disc component
Tssr105979 11 116657513 to 116657536 23 + TSS region transcription start site region 105979
Cpgi4192 11 116657915 to 116658097 182 CpG island CpG island 4192
Cpgi4193 11 116671204 to 116672396 1192 CpG island CpG island 4193
Tssr111961 11 116671554 to 116671573 19 - TSS region transcription start site region 111961
Tssr105980 11 116671658 to 116671694 36 + TSS region transcription start site region 105980
1810032O08Rik 11 116671660 to 116675798 4138 + protein coding gene RIKEN cDNA 1810032O08 gene
Snord1c 11 116672506 to 116672581 75 + snoRNA gene small nucleolar RNA, C/D box 1C
Snord1b 11 116674148 to 116674222 74 + snoRNA gene small nucleolar RNA, C/D box 1B
Snord1a 11 116674598 to 116674671 73 + snoRNA gene small nucleolar RNA, C/D box 1A
St6galnac2 11 116676703 to 116695234 18531 - protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
Tssr111962 11 116677442 to 116677448 6 - TSS region transcription start site region 111962
Tssr105981 11 116678254 to 116678255 1 + TSS region transcription start site region 105981
Tssr111963 11 116679185 to 116679191 6 - TSS region transcription start site region 111963
Tssr111964 11 116679193 to 116679203 10 - TSS region transcription start site region 111964
Tssr111965 11 116679221 to 116679226 5 - TSS region transcription start site region 111965
Tssr111966 11 116679982 to 116679999 17 - TSS region transcription start site region 111966
Tssr111967 11 116680056 to 116680068 12 - TSS region transcription start site region 111967
Tssr111968 11 116680075 to 116680086 11 - TSS region transcription start site region 111968
Tssr105982 11 116680278 to 116680293 15 + TSS region transcription start site region 105982
Tssr111969 11 116680596 to 116680601 5 - TSS region transcription start site region 111969
Tssr111970 11 116680704 to 116680713 9 - TSS region transcription start site region 111970
Tssr111971 11 116680874 to 116680914 40 - TSS region transcription start site region 111971
Cpgi4194 11 116694121 to 116695026 905 CpG island CpG island 4194
Tssr111972 11 116694555 to 116694560 5 - TSS region transcription start site region 111972
Tssr111973 11 116694580 to 116694668 88 - TSS region transcription start site region 111973
Tssr111974 11 116694779 to 116694800 21 - TSS region transcription start site region 111974
Tssr111975 11 116694802 to 116694882 80 - TSS region transcription start site region 111975
Tssr111976 11 116695229 to 116695242 13 - TSS region transcription start site region 111976