Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116478972-116589004

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prpsap1 11 116470845 to 116494202 23357 - protein coding gene phosphoribosyl pyrophosphate synthetase-associated protein 1
Tssr111929 11 116479727 to 116479750 23 - TSS region transcription start site region 111929
Tssr111930 11 116488331 to 116488336 5 - TSS region transcription start site region 111930
Cpgi4185 11 116489725 to 116490873 1148 CpG island CpG island 4185
Tssr111931 11 116490161 to 116490168 7 - TSS region transcription start site region 111931
Tssr111932 11 116490278 to 116490289 11 - TSS region transcription start site region 111932
Tssr111933 11 116490299 to 116490365 66 - TSS region transcription start site region 111933
Tssr111934 11 116494581 to 116494594 13 - TSS region transcription start site region 111934
Tssr111935 11 116494603 to 116494632 29 - TSS region transcription start site region 111935
Cpgi4186 11 116498604 to 116498885 281 CpG island CpG island 4186
Rpl36-ps1 11 116504536 to 116504838 302 + pseudogene ribosomal protein L36, pseudogene 1
Cpgi4187 11 116515463 to 116515811 348 CpG island CpG island 4187
Gm29292 11 116529215 to 116533077 3862 - antisense lncRNA gene predicted gene 29292
Tssr111936 11 116529562 to 116529566 4 - TSS region transcription start site region 111936
Sphk1 11 116530925 to 116536674 5749 + protein coding gene sphingosine kinase 1
Tssr105960 11 116531097 to 116531103 6 + TSS region transcription start site region 105960
Cpgi4188 11 116531226 to 116534444 3218 CpG island CpG island 4188
Tssr105961 11 116531826 to 116531842 16 + TSS region transcription start site region 105961
Tssr105962 11 116531843 to 116531874 31 + TSS region transcription start site region 105962
Tssr105963 11 116531886 to 116531896 10 + TSS region transcription start site region 105963
Tssr105964 11 116531996 to 116532014 18 + TSS region transcription start site region 105964
Tssr105965 11 116532422 to 116532425 3 + TSS region transcription start site region 105965
Tssr105966 11 116532441 to 116532478 37 + TSS region transcription start site region 105966
Tssr3738 11 116532498 to 116532501 3 + TSS region transcription start site region 3738
Tssr105967 11 116532550 to 116532561 11 + TSS region transcription start site region 105967
Tssr111937 11 116533069 to 116533123 54 - TSS region transcription start site region 111937
Tssr105968 11 116533257 to 116533275 18 + TSS region transcription start site region 105968
Tssr105969 11 116533285 to 116533303 18 + TSS region transcription start site region 105969
Tssr111938 11 116533695 to 116533709 14 - TSS region transcription start site region 111938
Tssr105970 11 116533962 to 116533972 10 + TSS region transcription start site region 105970
Tssr3739 11 116533972 to 116534004 32 - TSS region transcription start site region 3739
Tssr105971 11 116534037 to 116534054 17 + TSS region transcription start site region 105971
Tssr105972 11 116534058 to 116534069 11 + TSS region transcription start site region 105972
Ube2o 11 116537740 to 116581447 43707 - protein coding gene ubiquitin-conjugating enzyme E2O
Tssr111939 11 116543406 to 116543408 2 - TSS region transcription start site region 111939
Tssr111940 11 116549368 to 116549409 41 - TSS region transcription start site region 111940
Gm11742 11 116550418 to 116550650 232 + pseudogene predicted gene 11742
Tssr111941 11 116579627 to 116579631 4 - TSS region transcription start site region 111941
Cpgi4189 11 116580525 to 116581911 1386 CpG island CpG island 4189
Tssr111942 11 116581446 to 116581472 26 - TSS region transcription start site region 111942
Tssr111943 11 116581475 to 116581513 38 - TSS region transcription start site region 111943