Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116195166-116324217

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Acox1	11	116171888 to 116199045	27157	-	protein coding gene	acyl-Coenzyme A oxidase 1, palmitoyl
Tssr111884	11	116197987 to 116197997	10	-	TSS region	transcription start site region 111884
Tssr111885	11	116198254 to 116198269	15	-	TSS region	transcription start site region 111885
Tssr111886	11	116198332 to 116198347	15	-	TSS region	transcription start site region 111886
Cpgi4171	11	116198400 to 116199404	1004		CpG island	CpG island 4171
Tssr111887	11	116198659 to 116198663	4	-	TSS region	transcription start site region 111887
Tssr111888	11	116198673 to 116198677	4	-	TSS region	transcription start site region 111888
Tssr111889	11	116198701 to 116198836	135	-	TSS region	transcription start site region 111889
Tssr105949	11	116198853 to 116198903	50	+	TSS region	transcription start site region 105949
Ten1	11	116198855 to 116215318	16463	+	protein coding gene	TEN1 telomerase capping complex subunit
Tssr111890	11	116199006 to 116199037	31	-	TSS region	transcription start site region 111890
Tssr111891	11	116199040 to 116199090	50	-	TSS region	transcription start site region 111891
Tssr111892	11	116206477 to 116206484	7	-	TSS region	transcription start site region 111892
Tssr105950	11	116210963 to 116211006	43	+	TSS region	transcription start site region 105950
Cdk3	11	116216003 to 116220287	4284	+	polymorphic pseudogene	cyclin-dependent kinase 3
Evpl	11	116220559 to 116238077	17518	-	protein coding gene	envoplakin
Cpgi4172	11	116221819 to 116223150	1331		CpG island	CpG island 4172
Gm33250	11	116225260 to 116239239	13979	+	lncRNA gene	predicted gene, 33250
Cpgi4173	11	116232652 to 116232999	347		CpG island	CpG island 4173
Tssr105951	11	116232711 to 116232728	17	+	TSS region	transcription start site region 105951
Cpgi4174	11	116237861 to 116238373	512		CpG island	CpG island 4174
Tssr111893	11	116238083 to 116238097	14	-	TSS region	transcription start site region 111893
Srp68	11	116245166 to 116274217	29051	-	protein coding gene	signal recognition particle 68
Tssr111894	11	116247198 to 116247216	18	-	TSS region	transcription start site region 111894
Tssr111895	11	116262891 to 116262923	32	-	TSS region	transcription start site region 111895
Tssr111896	11	116273335 to 116273342	7	-	TSS region	transcription start site region 111896
Cpgi4175	11	116273507 to 116274570	1063		CpG island	CpG island 4175
Tssr111897	11	116274102 to 116274138	36	-	TSS region	transcription start site region 111897
Tssr105952	11	116274164 to 116274183	19	+	TSS region	transcription start site region 105952
Tssr111898	11	116274197 to 116274208	11	-	TSS region	transcription start site region 111898
Galr2	11	116280939 to 116283938	2999	+	protein coding gene	galanin receptor 2
Cpgi4176	11	116281174 to 116282138	964		CpG island	CpG island 4176
Cpgi4177	11	116282748 to 116283730	982		CpG island	CpG island 4177
Exoc7	11	116287998 to 116306749	18751	-	protein coding gene	exocyst complex component 7
Tssr111899	11	116292475 to 116292476	1	-	TSS region	transcription start site region 111899
Tssr111900	11	116300320 to 116300337	17	-	TSS region	transcription start site region 111900
Cpgi4178	11	116306103 to 116307209	1106		CpG island	CpG island 4178
Tssr111901	11	116306675 to 116306691	16	-	TSS region	transcription start site region 111901
Tssr111902	11	116306696 to 116306750	54	-	TSS region	transcription start site region 111902
Gm26730	11	116306864 to 116309510	2646	+	lincRNA gene	predicted gene, 26730
Tssr111903	11	116307168 to 116307190	22	-	TSS region	transcription start site region 111903
Cpgi4179	11	116318990 to 116319619	629		CpG island	CpG island 4179