Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116103220-116174096

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim47 11 116105750 to 116110235 4485 - protein coding gene tripartite motif-containing 47
Cpgi4162 11 116106158 to 116106535 377 CpG island CpG island 4162
Cpgi4163 11 116107900 to 116108361 461 CpG island CpG island 4163
Cpgi4164 11 116108842 to 116109136 294 CpG island CpG island 4164
Tssr105946 11 116108918 to 116108928 10 + TSS region transcription start site region 105946
Cpgi4165 11 116109316 to 116110659 1343 CpG island CpG island 4165
Tssr111847 11 116110185 to 116110206 21 - TSS region transcription start site region 111847
Tssr111848 11 116110211 to 116110259 48 - TSS region transcription start site region 111848
Tssr111849 11 116110266 to 116110283 17 - TSS region transcription start site region 111849
Tssr105947 11 116110327 to 116110349 22 + TSS region transcription start site region 105947
Tssr111850 11 116110406 to 116110417 11 - TSS region transcription start site region 111850
Tssr111851 11 116110717 to 116110739 22 - TSS region transcription start site region 111851
Trim65 11 116124708 to 116131260 6552 - protein coding gene tripartite motif-containing 65
Tssr111852 11 116125326 to 116125331 5 - TSS region transcription start site region 111852
Cpgi4166 11 116130259 to 116131225 966 CpG island CpG island 4166
Tssr111853 11 116131001 to 116131041 40 - TSS region transcription start site region 111853
Tssr111854 11 116131053 to 116131062 9 - TSS region transcription start site region 111854
Tssr111855 11 116131073 to 116131100 27 - TSS region transcription start site region 111855
Tssr111856 11 116131110 to 116131131 21 - TSS region transcription start site region 111856
Mrpl38 11 116131817 to 116138868 7051 - protein coding gene mitochondrial ribosomal protein L38
Tssr111857 11 116132520 to 116132540 20 - TSS region transcription start site region 111857
Tssr111858 11 116132573 to 116132584 11 - TSS region transcription start site region 111858
Tssr111859 11 116132877 to 116132912 35 - TSS region transcription start site region 111859
Cpgi4167 11 116138220 to 116139096 876 CpG island CpG island 4167
Tssr111860 11 116138775 to 116138788 13 - TSS region transcription start site region 111860
Tssr111861 11 116138789 to 116138848 59 - TSS region transcription start site region 111861
Tssr111862 11 116138850 to 116138859 9 - TSS region transcription start site region 111862
Tssr111863 11 116138862 to 116138873 11 - TSS region transcription start site region 111863
Fbf1 11 116142285 to 116168166 25881 - protein coding gene Fas (TNFRSF6) binding factor 1
Cpgi4168 11 116146476 to 116146670 194 CpG island CpG island 4168
Cpgi4169 11 116148939 to 116149201 262 CpG island CpG island 4169
Gm26413 11 116163910 to 116164035 125 - snoRNA gene predicted gene, 26413
Cpgi4170 11 116167710 to 116168507 797 CpG island CpG island 4170
Tssr111864 11 116168138 to 116168205 67 - TSS region transcription start site region 111864
Tssr111865 11 116168295 to 116168306 11 - TSS region transcription start site region 111865
Acox1 11 116171888 to 116199045 27157 - protein coding gene acyl-Coenzyme A oxidase 1, palmitoyl
Tssr111866 11 116173085 to 116173103 18 - TSS region transcription start site region 111866
Tssr111867 11 116173130 to 116173169 39 - TSS region transcription start site region 111867
Tssr111868 11 116173232 to 116173258 26 - TSS region transcription start site region 111868
Tssr111869 11 116173276 to 116173351 75 - TSS region transcription start site region 111869