Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116080211-116140259

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wbp2 11 116078573 to 116086995 8422 - protein coding gene WW domain binding protein 2
Tssr111841 11 116080263 to 116080274 11 - TSS region transcription start site region 111841
Tssr111842 11 116080280 to 116080316 36 - TSS region transcription start site region 111842
Tssr111843 11 116080341 to 116080353 12 - TSS region transcription start site region 111843
Tssr105944 11 116080606 to 116080621 15 + TSS region transcription start site region 105944
Tssr111844 11 116080616 to 116080628 12 - TSS region transcription start site region 111844
Tssr111845 11 116080663 to 116080675 12 - TSS region transcription start site region 111845
Cpgi4161 11 116086792 to 116087772 980 CpG island CpG island 4161
Tssr111846 11 116086929 to 116086979 50 - TSS region transcription start site region 111846
Tssr105945 11 116092196 to 116092200 4 + TSS region transcription start site region 105945
Trim47 11 116105750 to 116110235 4485 - protein coding gene tripartite motif-containing 47
Cpgi4162 11 116106158 to 116106535 377 CpG island CpG island 4162
Cpgi4163 11 116107900 to 116108361 461 CpG island CpG island 4163
Cpgi4164 11 116108842 to 116109136 294 CpG island CpG island 4164
Tssr105946 11 116108918 to 116108928 10 + TSS region transcription start site region 105946
Cpgi4165 11 116109316 to 116110659 1343 CpG island CpG island 4165
Tssr111847 11 116110185 to 116110206 21 - TSS region transcription start site region 111847
Tssr111848 11 116110211 to 116110259 48 - TSS region transcription start site region 111848
Tssr111849 11 116110266 to 116110283 17 - TSS region transcription start site region 111849
Tssr105947 11 116110327 to 116110349 22 + TSS region transcription start site region 105947
Tssr111850 11 116110406 to 116110417 11 - TSS region transcription start site region 111850
Tssr111851 11 116110717 to 116110739 22 - TSS region transcription start site region 111851
Trim65 11 116124708 to 116131260 6552 - protein coding gene tripartite motif-containing 65
Tssr111852 11 116125326 to 116125331 5 - TSS region transcription start site region 111852
Cpgi4166 11 116130259 to 116131225 966 CpG island CpG island 4166
Tssr111853 11 116131001 to 116131041 40 - TSS region transcription start site region 111853
Tssr111854 11 116131053 to 116131062 9 - TSS region transcription start site region 111854
Tssr111855 11 116131073 to 116131100 27 - TSS region transcription start site region 111855
Tssr111856 11 116131110 to 116131131 21 - TSS region transcription start site region 111856
Mrpl38 11 116131817 to 116138868 7051 - protein coding gene mitochondrial ribosomal protein L38
Tssr111857 11 116132520 to 116132540 20 - TSS region transcription start site region 111857
Tssr111858 11 116132573 to 116132584 11 - TSS region transcription start site region 111858
Tssr111859 11 116132877 to 116132912 35 - TSS region transcription start site region 111859
Cpgi4167 11 116138220 to 116139096 876 CpG island CpG island 4167
Tssr111860 11 116138775 to 116138788 13 - TSS region transcription start site region 111860
Tssr111861 11 116138789 to 116138848 59 - TSS region transcription start site region 111861
Tssr111862 11 116138850 to 116138859 9 - TSS region transcription start site region 111862
Tssr111863 11 116138862 to 116138873 11 - TSS region transcription start site region 111863