Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115721676-115811738

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42096 11 115722656 to 115726901 4245 - lncRNA gene predicted gene, 42096
Gm11703 11 115724326 to 115724808 482 - pseudogene predicted gene 11703
Gm23699 11 115727143 to 115727277 134 + snoRNA gene predicted gene, 23699
Gm11704 11 115729466 to 115729679 213 + pseudogene predicted gene 11704
Tssr3734 11 115730695 to 115730697 2 + TSS region transcription start site region 3734
Cpgi4146 11 115765203 to 115766202 999 CpG island CpG island 4146
Tssr105895 11 115765420 to 115765466 46 + TSS region transcription start site region 105895
Tmem94 11 115765433 to 115799033 33600 + protein coding gene transmembrane protein 94
Tssr105896 11 115765500 to 115765533 33 + TSS region transcription start site region 105896
Tssr105897 11 115766676 to 115766738 62 + TSS region transcription start site region 105897
Tssr105898 11 115766780 to 115766796 16 + TSS region transcription start site region 105898
Tssr105899 11 115766801 to 115766821 20 + TSS region transcription start site region 105899
Gm46302 11 115773682 to 115777241 3559 - lncRNA gene predicted gene, 46302
Tssr105900 11 115776236 to 115776277 41 + TSS region transcription start site region 105900
Tssr105901 11 115780660 to 115780688 28 + TSS region transcription start site region 105901
Tssr105902 11 115780698 to 115780718 20 + TSS region transcription start site region 105902
Tssr105903 11 115780737 to 115780756 19 + TSS region transcription start site region 105903
Tssr105904 11 115780765 to 115780786 21 + TSS region transcription start site region 105904
Cpgi4147 11 115791851 to 115792121 270 CpG island CpG island 4147
Mir5621 11 115795824 to 115795886 62 + miRNA gene microRNA 5621
Caskin2 11 115799183 to 115813639 14456 - protein coding gene CASK-interacting protein 2
Tssr111800 11 115808068 to 115808106 38 - TSS region transcription start site region 111800