Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115681676-115851738

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grb2 11 115644045 to 115708597 64552 - protein coding gene growth factor receptor bound protein 2
Tssr111791 11 115686178 to 115686194 16 - TSS region transcription start site region 111791
Tssr111792 11 115696575 to 115696600 25 - TSS region transcription start site region 111792
Tssr111793 11 115699257 to 115699268 11 - TSS region transcription start site region 111793
Tssr3733 11 115699278 to 115699281 3 - TSS region transcription start site region 3733
Tssr111794 11 115699313 to 115699324 11 - TSS region transcription start site region 111794
Tssr111795 11 115699331 to 115699404 73 - TSS region transcription start site region 111795
Tssr111796 11 115699427 to 115699438 11 - TSS region transcription start site region 111796
Tssr111797 11 115699461 to 115699514 53 - TSS region transcription start site region 111797
Tssr105893 11 115699593 to 115699642 49 + TSS region transcription start site region 105893
Cpgi4145 11 115707494 to 115709306 1812 CpG island CpG island 4145
Tssr105894 11 115708062 to 115708087 25 + TSS region transcription start site region 105894
Tssr111798 11 115708525 to 115708534 9 - TSS region transcription start site region 111798
Tssr111799 11 115708538 to 115708614 76 - TSS region transcription start site region 111799
Gm42096 11 115722656 to 115726901 4245 - lncRNA gene predicted gene, 42096
Gm11703 11 115724326 to 115724808 482 - pseudogene predicted gene 11703
Gm23699 11 115727143 to 115727277 134 + snoRNA gene predicted gene, 23699
Gm11704 11 115729466 to 115729679 213 + pseudogene predicted gene 11704
Tssr3734 11 115730695 to 115730697 2 + TSS region transcription start site region 3734
Cpgi4146 11 115765203 to 115766202 999 CpG island CpG island 4146
Tssr105895 11 115765420 to 115765466 46 + TSS region transcription start site region 105895
Tmem94 11 115765433 to 115799033 33600 + protein coding gene transmembrane protein 94
Tssr105896 11 115765500 to 115765533 33 + TSS region transcription start site region 105896
Tssr105897 11 115766676 to 115766738 62 + TSS region transcription start site region 105897
Tssr105898 11 115766780 to 115766796 16 + TSS region transcription start site region 105898
Tssr105899 11 115766801 to 115766821 20 + TSS region transcription start site region 105899
Gm46302 11 115773682 to 115777241 3559 - lncRNA gene predicted gene, 46302
Tssr105900 11 115776236 to 115776277 41 + TSS region transcription start site region 105900
Tssr105901 11 115780660 to 115780688 28 + TSS region transcription start site region 105901
Tssr105902 11 115780698 to 115780718 20 + TSS region transcription start site region 105902
Tssr105903 11 115780737 to 115780756 19 + TSS region transcription start site region 105903
Tssr105904 11 115780765 to 115780786 21 + TSS region transcription start site region 105904
Cpgi4147 11 115791851 to 115792121 270 CpG island CpG island 4147
Mir5621 11 115795824 to 115795886 62 + miRNA gene microRNA 5621
Caskin2 11 115799183 to 115813639 14456 - protein coding gene CASK-interacting protein 2
Tssr111800 11 115808068 to 115808106 38 - TSS region transcription start site region 111800
Tssr111801 11 115812136 to 115812230 94 - TSS region transcription start site region 111801
Cpgi4148 11 115813228 to 115815560 2332 CpG island CpG island 4148
Tssr111802 11 115813563 to 115813593 30 - TSS region transcription start site region 111802
Tssr111803 11 115813604 to 115813609 5 - TSS region transcription start site region 111803
Tssr111804 11 115813621 to 115813654 33 - TSS region transcription start site region 111804
Tssr105905 11 115814276 to 115814279 3 + TSS region transcription start site region 105905
Tsen54 11 115814724 to 115823094 8370 + protein coding gene tRNA splicing endonuclease subunit 54
Tssr105906 11 115814732 to 115814778 46 + TSS region transcription start site region 105906
Cpgi4149 11 115823624 to 115824776 1152 CpG island CpG island 4149
Tssr105907 11 115824029 to 115824097 68 + TSS region transcription start site region 105907
Llgl2 11 115824049 to 115855780 31731 + protein coding gene LLGL2 scribble cell polarity complex component
Tssr105908 11 115832804 to 115832820 16 + TSS region transcription start site region 105908
Tssr105909 11 115834338 to 115834349 11 + TSS region transcription start site region 105909
Tssr111805 11 115843981 to 115843986 5 - TSS region transcription start site region 111805
D11Jpk4 11 115846700 to 115846851 151 DNA segment DNA segment, Chr 11, Japan, Kominami 4