Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115499117-115629130

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jpt1 11 115497353 to 115514370 17017 - protein coding gene Jupiter microtubule associated homolog 1
Cpgi4139 11 115513455 to 115514631 1176 CpG island CpG island 4139
Tssr111766 11 115514102 to 115514122 20 - TSS region transcription start site region 111766
Tssr111767 11 115514142 to 115514152 10 - TSS region transcription start site region 111767
Tssr111768 11 115514374 to 115514393 19 - TSS region transcription start site region 111768
Sumo2 11 115523109 to 115536230 13121 - protein coding gene small ubiquitin-like modifier 2
Cpgi4140 11 115535288 to 115536771 1483 CpG island CpG island 4140
Tssr111769 11 115535804 to 115535863 59 - TSS region transcription start site region 111769
Tssr111770 11 115536236 to 115536267 31 - TSS region transcription start site region 111770
Tssr105883 11 115536471 to 115536516 45 + TSS region transcription start site region 105883
Cpgi4141 11 115563942 to 115564768 826 CpG island CpG island 4141
Tssr111771 11 115564117 to 115564130 13 - TSS region transcription start site region 111771
Nup85 11 115564436 to 115583924 19488 + protein coding gene nucleoporin 85
Tssr105884 11 115564437 to 115564490 53 + TSS region transcription start site region 105884
Tssr105885 11 115581765 to 115581776 11 + TSS region transcription start site region 105885
Gga3 11 115584255 to 115603925 19670 - protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 3
Tssr111772 11 115590659 to 115590675 16 - TSS region transcription start site region 111772
Tssr111773 11 115590854 to 115590860 6 - TSS region transcription start site region 111773
Gm25364 11 115601656 to 115601762 106 + snRNA gene predicted gene, 25364
Cpgi4142 11 115603302 to 115604942 1640 CpG island CpG island 4142
Tssr111774 11 115603866 to 115603921 55 - TSS region transcription start site region 111774
Tssr105886 11 115603920 to 115603969 49 + TSS region transcription start site region 105886
Tssr105887 11 115603975 to 115603994 19 + TSS region transcription start site region 105887
Tssr105888 11 115604130 to 115604164 34 + TSS region transcription start site region 105888
Mrps7 11 115604151 to 115607624 3473 + protein coding gene mitchondrial ribosomal protein S7
Tssr105889 11 115604169 to 115604180 11 + TSS region transcription start site region 105889
Mif4gd 11 115607918 to 115612969 5051 - protein coding gene MIF4G domain containing
Obq33 11 115609643 to 115609643 0 QTL obesity QTL 33
Cpgi4143 11 115612001 to 115613272 1271 CpG island CpG island 4143
Tssr111775 11 115612491 to 115612503 12 - TSS region transcription start site region 111775
Tssr111776 11 115612507 to 115612547 40 - TSS region transcription start site region 111776
Tssr105890 11 115612602 to 115612611 9 + TSS region transcription start site region 105890
Tssr111777 11 115612896 to 115612907 11 - TSS region transcription start site region 111777
Tssr111778 11 115612913 to 115612937 24 - TSS region transcription start site region 111778
Tssr111779 11 115612940 to 115612975 35 - TSS region transcription start site region 111779
Tssr105891 11 115613485 to 115613500 15 + TSS region transcription start site region 105891
Slc25a19 11 115614178 to 115628295 14117 - protein coding gene solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
Gm26613 11 115615462 to 115626707 11245 + lincRNA gene predicted gene, 26613
Tssr111780 11 115627702 to 115627709 7 - TSS region transcription start site region 111780
Cpgi4144 11 115627713 to 115628479 766 CpG island CpG island 4144
Tssr111781 11 115627727 to 115627738 11 - TSS region transcription start site region 111781
Tssr111782 11 115627743 to 115627759 16 - TSS region transcription start site region 111782
Tssr111783 11 115627761 to 115627791 30 - TSS region transcription start site region 111783
Tssr111784 11 115628093 to 115628122 29 - TSS region transcription start site region 111784
Tssr111785 11 115628125 to 115628164 39 - TSS region transcription start site region 111785
Tssr111786 11 115628233 to 115628250 17 - TSS region transcription start site region 111786
Tssr111787 11 115628260 to 115628298 38 - TSS region transcription start site region 111787
Tssr105892 11 115628404 to 115628423 19 + TSS region transcription start site region 105892