Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115465288-115606771

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc16a5 11 115462474 to 115474398 11924 + protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 5
Tssr105875 11 115465553 to 115465557 4 + TSS region transcription start site region 105875
Tssr3732 11 115466668 to 115466673 5 + TSS region transcription start site region 3732
Tssr105876 11 115466745 to 115466756 11 + TSS region transcription start site region 105876
Tssr105877 11 115468296 to 115468300 4 + TSS region transcription start site region 105877
Cpgi4135 11 115469344 to 115470085 741 CpG island CpG island 4135
Tssr111759 11 115474065 to 115474084 19 - TSS region transcription start site region 111759
Cpgi4136 11 115475377 to 115476262 885 CpG island CpG island 4136
Tssr105878 11 115475645 to 115475727 82 + TSS region transcription start site region 105878
Armc7 11 115475667 to 115490467 14800 + protein coding gene armadillo repeat containing 7
Tssr105879 11 115475743 to 115475790 47 + TSS region transcription start site region 105879
Tssr105880 11 115475802 to 115475829 27 + TSS region transcription start site region 105880
Tssr105881 11 115475972 to 115475976 4 + TSS region transcription start site region 105881
Tssr105882 11 115480928 to 115480950 22 + TSS region transcription start site region 105882
Cpgi4137 11 115488723 to 115488968 245 CpG island CpG island 4137
Nt5c 11 115490420 to 115491862 1442 - protein coding gene 5',3'-nucleotidase, cytosolic
Tssr111760 11 115490668 to 115490684 16 - TSS region transcription start site region 111760
Cpgi4138 11 115491119 to 115492070 951 CpG island CpG island 4138
Tssr111761 11 115491158 to 115491198 40 - TSS region transcription start site region 111761
Tssr111762 11 115491293 to 115491339 46 - TSS region transcription start site region 111762
Tssr111763 11 115491646 to 115491666 20 - TSS region transcription start site region 111763
Tssr111764 11 115491796 to 115491865 69 - TSS region transcription start site region 111764
Gm11694 11 115493024 to 115493182 158 + pseudogene predicted gene 11694
Jpt1 11 115497353 to 115514370 17017 - protein coding gene Jupiter microtubule associated homolog 1
Tssr111765 11 115498238 to 115498278 40 - TSS region transcription start site region 111765
Cpgi4139 11 115513455 to 115514631 1176 CpG island CpG island 4139
Tssr111766 11 115514102 to 115514122 20 - TSS region transcription start site region 111766
Tssr111767 11 115514142 to 115514152 10 - TSS region transcription start site region 111767
Tssr111768 11 115514374 to 115514393 19 - TSS region transcription start site region 111768
Sumo2 11 115523109 to 115536230 13121 - protein coding gene small ubiquitin-like modifier 2
Cpgi4140 11 115535288 to 115536771 1483 CpG island CpG island 4140
Tssr111769 11 115535804 to 115535863 59 - TSS region transcription start site region 111769
Tssr111770 11 115536236 to 115536267 31 - TSS region transcription start site region 111770
Tssr105883 11 115536471 to 115536516 45 + TSS region transcription start site region 105883
Cpgi4141 11 115563942 to 115564768 826 CpG island CpG island 4141
Tssr111771 11 115564117 to 115564130 13 - TSS region transcription start site region 111771
Nup85 11 115564436 to 115583924 19488 + protein coding gene nucleoporin 85
Tssr105884 11 115564437 to 115564490 53 + TSS region transcription start site region 105884
Tssr105885 11 115581765 to 115581776 11 + TSS region transcription start site region 105885
Gga3 11 115584255 to 115603925 19670 - protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 3
Tssr111772 11 115590659 to 115590675 16 - TSS region transcription start site region 111772
Tssr111773 11 115590854 to 115590860 6 - TSS region transcription start site region 111773
Gm25364 11 115601656 to 115601762 106 + snRNA gene predicted gene, 25364
Cpgi4142 11 115603302 to 115604942 1640 CpG island CpG island 4142
Tssr111774 11 115603866 to 115603921 55 - TSS region transcription start site region 111774
Tssr105886 11 115603920 to 115603969 49 + TSS region transcription start site region 105886
Tssr105887 11 115603975 to 115603994 19 + TSS region transcription start site region 105887
Tssr105888 11 115604130 to 115604164 34 + TSS region transcription start site region 105888
Mrps7 11 115604151 to 115607624 3473 + protein coding gene mitchondrial ribosomal protein S7
Tssr105889 11 115604169 to 115604180 11 + TSS region transcription start site region 105889