Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115393594-115414300

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdr2l 11 115381916 to 115396132 14216 + protein coding gene cerebellar degeneration-related protein 2-like
Cpgi4129 11 115393355 to 115394205 850 CpG island CpG island 4129
Tssr105860 11 115394636 to 115394642 6 + TSS region transcription start site region 105860
Gm32013 11 115397170 to 115401253 4083 - lncRNA gene predicted gene, 32013
Cpgi4130 11 115403594 to 115404300 706 CpG island CpG island 4130
Tssr105861 11 115403734 to 115403777 43 + TSS region transcription start site region 105861
Mrpl58 11 115403739 to 115410919 7180 + protein coding gene mitochondrial ribosomal protein L58
Ict1os 11 115406586 to 115408314 1728 - antisense lncRNA gene immature colon carcinoma transcript 1, opposite strand
Cpgi4131 11 115412709 to 115413859 1150 CpG island CpG island 4131
Tssr105862 11 115412820 to 115412834 14 + TSS region transcription start site region 105862
n-TRcct5 11 115412981 to 115413053 72 + tRNA gene nuclear encoded tRNA arginine 5 (anticodon CCT)
n-TRcct3 11 115413304 to 115413376 72 - tRNA gene nuclear encoded tRNA arginine 3 (anticodon CCT)
n-TRtcg4 11 115413779 to 115413851 72 + tRNA gene nuclear encoded tRNA arginine 4 (anticodon TCG)