Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:114468524-114872331

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4090 11 114472488 to 114472728 240 CpG island CpG island 4090
Gm39471 11 114479909 to 114484619 4710 - lncRNA gene predicted gene, 39471
Gm39472 11 114489206 to 114504225 15019 + lncRNA gene predicted gene, 39472
Gm31724 11 114517389 to 114611686 94297 - lncRNA gene predicted gene, 31724
Cpgi4091 11 114527428 to 114527928 500 CpG island CpG island 4091
Gm31781 11 114614014 to 114626194 12180 - lncRNA gene predicted gene, 31781
Cpgi4092 11 114628414 to 114628785 371 CpG island CpG island 4092
Cpgi4093 11 114636953 to 114637476 523 CpG island CpG island 4093
Cpgi4094 11 114639757 to 114639936 179 CpG island CpG island 4094
Cpgi4095 11 114652612 to 114652861 249 CpG island CpG island 4095
Gm11689 11 114664608 to 114664909 301 + pseudogene predicted gene 11689
Tssr105774 11 114666998 to 114667031 33 + TSS region transcription start site region 105774
Cpgi4096 11 114668379 to 114669614 1235 CpG island CpG island 4096
Rpl38 11 114668524 to 114672331 3807 + protein coding gene ribosomal protein L38
Tssr105775 11 114668570 to 114668607 37 + TSS region transcription start site region 105775
Tssr105776 11 114668753 to 114668774 21 + TSS region transcription start site region 105776
Cpgi4097 11 114675358 to 114676246 888 CpG island CpG island 4097
Ttyh2 11 114675468 to 114720984 45516 + protein coding gene tweety family member 2
Tssr105777 11 114675474 to 114675495 21 + TSS region transcription start site region 105777
Tssr3723 11 114675502 to 114675505 3 + TSS region transcription start site region 3723
Tssr105778 11 114675508 to 114675522 14 + TSS region transcription start site region 105778
Tssr105779 11 114702545 to 114702549 4 + TSS region transcription start site region 105779
Tssr105780 11 114710861 to 114710883 22 + TSS region transcription start site region 105780
Tssr105781 11 114717616 to 114717620 4 + TSS region transcription start site region 105781
Tssr105782 11 114720232 to 114720235 3 + TSS region transcription start site region 105782
Tssr105783 11 114720395 to 114720400 5 + TSS region transcription start site region 105783
Cpgi4098 11 114727110 to 114727532 422 CpG island CpG island 4098
Tssr105784 11 114727384 to 114727435 51 + TSS region transcription start site region 105784
Dnaic2 11 114727408 to 114757889 30481 + protein coding gene dynein, axonemal, intermediate chain 2
Tssr105785 11 114727440 to 114727460 20 + TSS region transcription start site region 105785
Cpgi4099 11 114732911 to 114733180 269 CpG island CpG island 4099
Tssr3724 11 114741712 to 114741715 3 + TSS region transcription start site region 3724
Tssr105786 11 114741722 to 114741734 12 + TSS region transcription start site region 105786
Tssr3725 11 114741736 to 114741742 6 + TSS region transcription start site region 3725
Cpgi4100 11 114764736 to 114765569 833 CpG island CpG island 4100
Tssr105787 11 114765363 to 114765438 75 + TSS region transcription start site region 105787
Kif19a 11 114765388 to 114790739 25351 + protein coding gene kinesin family member 19A
Tssr105788 11 114765444 to 114765456 12 + TSS region transcription start site region 105788
D11Mit257 11 114778293 to 114778599 306 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 257
D11Mit256 11 114778471 to 114778554 83 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 256
Tssr105789 11 114780489 to 114780497 8 + TSS region transcription start site region 105789
Cpgi4101 11 114785342 to 114786917 1575 CpG island CpG island 4101
Cpgi4102 11 114789103 to 114789518 415 CpG island CpG island 4102
Tssr105790 11 114789623 to 114789651 28 + TSS region transcription start site region 105790
Tssr105791 11 114790704 to 114790706 2 + TSS region transcription start site region 105791
Btbd17 11 114791217 to 114795945 4728 - protein coding gene BTB (POZ) domain containing 17
Cpgi4103 11 114791289 to 114792630 1341 CpG island CpG island 4103
Tssr111665 11 114795888 to 114795903 15 - TSS region transcription start site region 111665
Gpr142 11 114798924 to 114806745 7821 + protein coding gene G protein-coupled receptor 142
Cpgi4104 11 114822718 to 114822938 220 CpG island CpG island 4104
Cpgi4105 11 114850442 to 114852933 2491 CpG island CpG island 4105
Tssr105792 11 114851122 to 114851140 18 + TSS region transcription start site region 105792
Tssr105793 11 114851142 to 114851158 16 + TSS region transcription start site region 105793
Gprc5c 11 114851152 to 114872617 21465 + protein coding gene G protein-coupled receptor, family C, group 5, member C
Tssr105794 11 114851392 to 114851426 34 + TSS region transcription start site region 105794
Tssr105795 11 114851507 to 114851553 46 + TSS region transcription start site region 105795
Tssr105796 11 114851601 to 114851612 11 + TSS region transcription start site region 105796
Tssr105797 11 114851615 to 114851646 31 + TSS region transcription start site region 105797
Tssr105798 11 114851657 to 114851666 9 + TSS region transcription start site region 105798
Tssr105799 11 114851814 to 114851868 54 + TSS region transcription start site region 105799
Tssr105800 11 114851907 to 114851962 55 + TSS region transcription start site region 105800
Tssr105801 11 114852028 to 114852042 14 + TSS region transcription start site region 105801
Tssr105802 11 114852053 to 114852075 22 + TSS region transcription start site region 105802
Tssr105803 11 114852183 to 114852191 8 + TSS region transcription start site region 105803
Tssr105804 11 114852219 to 114852242 23 + TSS region transcription start site region 105804