Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:113092622-113682624

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2610035D17Rik 11 113043906 to 113201838 157932 - lincRNA gene RIKEN cDNA 2610035D17 gene
Tssr3720 11 113094297 to 113094310 13 + TSS region transcription start site region 3720
D11Mit42.1 11 113124742 to 113124870 128 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 42.1
D11Mit42 11 113124852 to 113124967 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 42
Gm39467 11 113132826 to 113134232 1406 - lncRNA gene predicted gene, 39467
Tssr111618 11 113155140 to 113155157 17 - TSS region transcription start site region 111618
D11Mit254 11 113162866 to 113163140 274 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 254
Cpgi4074 11 113165050 to 113165371 321 CpG island CpG island 4074
D11Mit12 11 113167045 to 113167183 138 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 12
Inf1 11 113167183 to 44739211 -68427972 QTL acute ozone induced inflammation
Tssr111619 11 113171857 to 113171872 15 - TSS region transcription start site region 111619
Tssr111620 11 113171942 to 113171959 17 - TSS region transcription start site region 111620
Tssr111621 11 113172951 to 113172958 7 - TSS region transcription start site region 111621
Tssr111622 11 113172978 to 113173041 63 - TSS region transcription start site region 111622
Tssr3721 11 113180845 to 113180848 3 + TSS region transcription start site region 3721
Tssr111623 11 113197486 to 113197490 4 - TSS region transcription start site region 111623
Cpgi4075 11 113200979 to 113201936 957 CpG island CpG island 4075
Tssr111624 11 113201834 to 113201847 13 - TSS region transcription start site region 111624
4732490B19Rik 11 113203315 to 113209669 6354 - lincRNA gene RIKEN cDNA 4732490B19 gene
Tssr111625 11 113209633 to 113209654 21 - TSS region transcription start site region 111625
Gm39505 11 113217679 to 113219280 1601 - lncRNA gene predicted gene, 39505
Slc39a11 11 113244853 to 113650079 405226 - protein coding gene solute carrier family 39 (metal ion transporter), member 11
D11Mit168 11 113246848 to 113246994 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 168
Cd8mts4 11 113246848 to 113246994 146 QTL CD8 memory T cell subset 4
D11Dcr27 11 113246851 to 113246958 107 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 27
Tssr105750 11 113387622 to 113387624 2 + TSS region transcription start site region 105750
Gm42094 11 113397657 to 113400704 3047 + lncRNA gene predicted gene, 42094
Tssr111626 11 113444689 to 113444716 27 - TSS region transcription start site region 111626
Tssr111627 11 113464350 to 113464352 2 - TSS region transcription start site region 111627
Gm16487 11 113467977 to 113472014 4037 + pseudogene predicted gene 16487
Tssr111628 11 113514540 to 113514571 31 - TSS region transcription start site region 111628
Cpgi4076 11 113565604 to 113565942 338 CpG island CpG island 4076
Tssr111629 11 113565740 to 113565792 52 - TSS region transcription start site region 111629
Cpgi4077 11 113618599 to 113619969 1370 CpG island CpG island 4077
Tssr105751 11 113619318 to 113619346 28 + TSS region transcription start site region 105751
Tssr105752 11 113619380 to 113619385 5 + TSS region transcription start site region 105752
Sstr2 11 113619481 to 113625895 6414 + protein coding gene somatostatin receptor 2
Cpgi4078 11 113648249 to 113648442 193 CpG island CpG island 4078
Cpgi4079 11 113648971 to 113650370 1399 CpG island CpG island 4079
Cog1 11 113649169 to 113667054 17885 + protein coding gene component of oligomeric golgi complex 1
Tssr105753 11 113649519 to 113649560 41 + TSS region transcription start site region 105753
Tssr105754 11 113649577 to 113649584 7 + TSS region transcription start site region 105754
Tssr111630 11 113650041 to 113650100 59 - TSS region transcription start site region 111630
Fam104a 11 113661319 to 113684155 22836 - protein coding gene family with sequence similarity 104, member A
Tssr111631 11 113676115 to 113676123 8 - TSS region transcription start site region 111631
Gm11693 11 113678530 to 113679331 801 + pseudogene predicted gene 11693