Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:110413042-111013165

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmtb6 11 107725518 to 110629004 2903486 QTL hemostasis and thrombosis rebleeding time 6
Map2k6 11 110399103 to 110516201 117098 + protein coding gene mitogen-activated protein kinase kinase 6
Gm10836 11 110444903 to 110449328 4425 unclassified gene predicted gene 10836
Gm39446 11 110473119 to 110477114 3995 - lncRNA gene predicted gene, 39446
Tssr105714 11 110479302 to 110479345 43 + TSS region transcription start site region 105714
Tssr105715 11 110479348 to 110479365 17 + TSS region transcription start site region 105715
Tssr105716 11 110479373 to 110479386 13 + TSS region transcription start site region 105716
D11Mit300 11 110493228 to 110493308 80 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 300
Gm30009 11 110532472 to 110533390 918 - lncRNA gene predicted gene, 30009
Tssr111604 11 110533225 to 110533275 50 - TSS region transcription start site region 111604
Tssr105717 11 110535903 to 110535940 37 + TSS region transcription start site region 105717
Gm11682 11 110544507 to 110546399 1892 + lincRNA gene predicted gene 11682
Gm46300 11 110548489 to 110552489 4000 - lncRNA gene predicted gene, 46300
Cpgi4068 11 110563251 to 110563449 198 CpG island CpG island 4068
D11Mit336 11 110628883 to 110629004 121 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 336
D11Mit225 11 110644458 to 110644575 117 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 225
D11Dcr23 11 110713037 to 110713181 144 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 23
D11Mit334 11 110713042 to 110713165 123 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 334
Sstapa3 11 110713165 to 97006867 -13706298 QTL suseptibility to Staphylococcus aureus infection 3
Tssr111605 11 110951909 to 110951914 5 - TSS region transcription start site region 111605
Tssr105718 11 110968016 to 110968042 26 + TSS region transcription start site region 105718
Kcnj16 11 110968033 to 111027968 59935 + protein coding gene potassium inwardly-rectifying channel, subfamily J, member 16
Tssr105719 11 110968056 to 110968070 14 + TSS region transcription start site region 105719
Tssr105720 11 110973035 to 110973039 4 + TSS region transcription start site region 105720
D11Mit252 11 110985100 to 110985195 95 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 252
Tssr105721 11 110997054 to 110997062 8 + TSS region transcription start site region 105721
Tssr105722 11 110997085 to 110997097 12 + TSS region transcription start site region 105722
Tssr105723 11 110997493 to 110997504 11 + TSS region transcription start site region 105723
Tssr105724 11 110997509 to 110997542 33 + TSS region transcription start site region 105724
Tssr105725 11 110997544 to 110997552 8 + TSS region transcription start site region 105725