Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:109400634-109440646

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gna13	11	109362831 to 109401369	38538	+	protein coding gene	guanine nucleotide binding protein, alpha 13
Tssr105667	11	109400821 to 109400840	19	+	TSS region	transcription start site region 105667
Tssr105668	11	109413909 to 109413927	18	+	TSS region	transcription start site region 105668
9930022D16Rik	11	109413917 to 109420405	6488	+	protein coding gene	RIKEN cDNA 9930022D16 gene
Tssr111538	11	109414861 to 109414872	11	-	TSS region	transcription start site region 111538
Tssr111539	11	109420634 to 109420646	12	-	TSS region	transcription start site region 111539
Cpgi4054	11	109425428 to 109426449	1021		CpG island	CpG island 4054
Tssr105669	11	109425580 to 109425600	20	+	TSS region	transcription start site region 105669
Tssr105670	11	109425608 to 109425622	14	+	TSS region	transcription start site region 105670
Tssr105671	11	109425664 to 109425677	13	+	TSS region	transcription start site region 105671
Tssr111540	11	109425760 to 109425770	10	-	TSS region	transcription start site region 111540
Tssr105672	11	109425940 to 109425952	12	+	TSS region	transcription start site region 105672
Amz2	11	109425946 to 109452813	26867	+	protein coding gene	archaelysin family metallopeptidase 2
Tssr105673	11	109425967 to 109426010	43	+	TSS region	transcription start site region 105673
Tssr105674	11	109426154 to 109426222	68	+	TSS region	transcription start site region 105674
Tssr105675	11	109426223 to 109426255	32	+	TSS region	transcription start site region 105675
Tssr105676	11	109426372 to 109426389	17	+	TSS region	transcription start site region 105676
Tssr3712	11	109427017 to 109427027	10	+	TSS region	transcription start site region 3712
Tssr105677	11	109432711 to 109432730	19	+	TSS region	transcription start site region 105677
Gm15642	11	109437172 to 109438145	973	-	antisense lncRNA gene	predicted gene 15642
Cpgi4055	11	109439944 to 109440354	410		CpG island	CpG island 4055
Tssr105678	11	109440072 to 109440079	7	+	TSS region	transcription start site region 105678
Gm45916	11	109440078 to 109453359	13281	+	lncRNA gene	predicted gene, 45916
Tssr105679	11	109440097 to 109440173	76	+	TSS region	transcription start site region 105679