Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:109293878-109395258

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rgs9 11 109225355 to 109298129 72774 - protein coding gene regulator of G-protein signaling 9
Cpgi4051 11 109297828 to 109298373 545 CpG island CpG island 4051
Tssr111529 11 109298072 to 109298079 7 - TSS region transcription start site region 111529
Tssr111530 11 109298090 to 109298118 28 - TSS region transcription start site region 111530
Tssr111531 11 109298121 to 109298142 21 - TSS region transcription start site region 111531
Gm39441 11 109298225 to 109307787 9562 + lncRNA gene predicted gene, 39441
Cpgi4052 11 109312325 to 109312528 203 CpG island CpG island 4052
D11Mit181 11 109328350 to 109328475 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 181
nmf148 11 109328475 to 98683655 -10644820 heritable phenotypic marker neuroscience mutagenesis facility, 148
1600015H23Rik 11 109343878 to 109345258 1380 + lncRNA gene RIKEN cDNA 1600015H23 gene
Tssr105633 11 109343924 to 109343955 31 + TSS region transcription start site region 105633
Tssr105634 11 109344281 to 109344297 16 + TSS region transcription start site region 105634
1700096J18Rik 11 109346867 to 109353651 6784 + lincRNA gene RIKEN cDNA 1700096J18 gene
Tssr105635 11 109346875 to 109346886 11 + TSS region transcription start site region 105635
Tssr105636 11 109353699 to 109353721 22 + TSS region transcription start site region 105636
Gm11696 11 109354778 to 109363654 8876 - antisense lncRNA gene predicted gene 11696
Tssr111532 11 109358742 to 109358779 37 - TSS region transcription start site region 111532
Tssr105637 11 109359584 to 109359614 30 + TSS region transcription start site region 105637
Tssr105638 11 109361935 to 109361942 7 + TSS region transcription start site region 105638
Cpgi4053 11 109361988 to 109363754 1766 CpG island CpG island 4053
Tssr105639 11 109362029 to 109362045 16 + TSS region transcription start site region 105639
Tssr105640 11 109362061 to 109362075 14 + TSS region transcription start site region 105640
Tssr105641 11 109362088 to 109362104 16 + TSS region transcription start site region 105641
Tssr111533 11 109362442 to 109362450 8 - TSS region transcription start site region 111533
Tssr111534 11 109362465 to 109362475 10 - TSS region transcription start site region 111534
Tssr111535 11 109362534 to 109362604 70 - TSS region transcription start site region 111535
Tssr105642 11 109362706 to 109362739 33 + TSS region transcription start site region 105642
Tssr105643 11 109362771 to 109362854 83 + TSS region transcription start site region 105643
Gna13 11 109362831 to 109401369 38538 + protein coding gene guanine nucleotide binding protein, alpha 13
Tssr105644 11 109362855 to 109362868 13 + TSS region transcription start site region 105644
Tssr105645 11 109362873 to 109362878 5 + TSS region transcription start site region 105645
Tssr105646 11 109362883 to 109362907 24 + TSS region transcription start site region 105646
Tssr105647 11 109362926 to 109362977 51 + TSS region transcription start site region 105647
Tssr105648 11 109363064 to 109363076 12 + TSS region transcription start site region 105648
Tssr111536 11 109363181 to 109363213 32 - TSS region transcription start site region 111536
Tssr105649 11 109363782 to 109363786 4 + TSS region transcription start site region 105649
Tssr105650 11 109365030 to 109365061 31 + TSS region transcription start site region 105650
Tssr105651 11 109365062 to 109365063 1 + TSS region transcription start site region 105651
Tssr105652 11 109365082 to 109365088 6 + TSS region transcription start site region 105652
Tssr105653 11 109365098 to 109365154 56 + TSS region transcription start site region 105653
Tssr105654 11 109365174 to 109365191 17 + TSS region transcription start site region 105654
Tssr105655 11 109365503 to 109365514 11 + TSS region transcription start site region 105655
Tssr111537 11 109366977 to 109367012 35 - TSS region transcription start site region 111537
Tssr105656 11 109386558 to 109386588 30 + TSS region transcription start site region 105656
Tssr105657 11 109394227 to 109394234 7 + TSS region transcription start site region 105657