Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:108921494-109094783

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4047 11 108920119 to 108922176 2057 CpG island CpG island 4047
Axin2 11 108920349 to 108950783 30434 + protein coding gene axin 2
Tssr105624 11 108921670 to 108921684 14 + TSS region transcription start site region 105624
Cpgi4048 11 108922476 to 108922908 432 CpG island CpG island 4048
Tssr105625 11 108923277 to 108923286 9 + TSS region transcription start site region 105625
Tssr3710 11 108936694 to 108936695 1 + TSS region transcription start site region 3710
Gm11670 11 108939310 to 108942015 2705 - antisense lncRNA gene predicted gene 11670
Tssr105626 11 108941567 to 108941571 4 + TSS region transcription start site region 105626
Gm36876 11 108981494 to 109034783 53289 + lncRNA gene predicted gene, 36876
Gm11668 11 109007651 to 109008781 1130 + pseudogene predicted gene 11668
Cpgi4049 11 109011642 to 109012316 674 CpG island CpG island 4049
Tssr111515 11 109011705 to 109011732 27 - TSS region transcription start site region 111515
Tssr105627 11 109011715 to 109011755 40 + TSS region transcription start site region 105627
Tssr111516 11 109011771 to 109011782 11 - TSS region transcription start site region 111516
Tssr105628 11 109011815 to 109011826 11 + TSS region transcription start site region 105628
Tssr105629 11 109011831 to 109011859 28 + TSS region transcription start site region 105629
Tssr111517 11 109011840 to 109011853 13 - TSS region transcription start site region 111517
Tssr111518 11 109011860 to 109011871 11 - TSS region transcription start site region 111518
Tssr105630 11 109011869 to 109011906 37 + TSS region transcription start site region 105630
Tssr111519 11 109011873 to 109011882 9 - TSS region transcription start site region 111519
Tssr111520 11 109011903 to 109011940 37 - TSS region transcription start site region 111520
Tssr105631 11 109011986 to 109011994 8 + TSS region transcription start site region 105631
Tssr111521 11 109011988 to 109012000 12 - TSS region transcription start site region 111521
Gm24149 11 109066984 to 109067090 106 - snRNA gene predicted gene, 24149