Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:108375192-108910615

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36709 11 108366827 to 108381121 14294 - lncRNA gene predicted gene, 36709
Gm11656 11 108377877 to 108381093 3216 + sense intronic lncRNA gene predicted gene 11656
Tssr105601 11 108381166 to 108381171 5 + TSS region transcription start site region 105601
Tssr105602 11 108381195 to 108381202 7 + TSS region transcription start site region 105602
Tssr105603 11 108381204 to 108381229 25 + TSS region transcription start site region 105603
Tssr105604 11 108395288 to 108395324 36 + TSS region transcription start site region 105604
Apoh 11 108395297 to 108414396 19099 + protein coding gene apolipoprotein H
Tssr105605 11 108395876 to 108395898 22 + TSS region transcription start site region 105605
Tssr105606 11 108395926 to 108395951 25 + TSS region transcription start site region 105606
Tssr105607 11 108404813 to 108404828 15 + TSS region transcription start site region 105607
Tssr105608 11 108407280 to 108407307 27 + TSS region transcription start site region 105608
Gm11667 11 108423273 to 108423758 485 + pseudogene predicted gene 11667
Cpgi4046 11 108424909 to 108425913 1004 CpG island CpG island 4046
Tssr111512 11 108424981 to 108424998 17 - TSS region transcription start site region 111512
Cep112 11 108425192 to 108860615 435423 + protein coding gene centrosomal protein 112
Tssr105609 11 108425242 to 108425304 62 + TSS region transcription start site region 105609
D11Mit224 11 108482862 to 108483011 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 224
Cep112os1 11 108529097 to 108533664 4567 - antisense lncRNA gene centrosomal protein 112, opposite strand 1
Tssr111513 11 108533654 to 108533679 25 - TSS region transcription start site region 111513
Tssr111514 11 108533694 to 108533697 3 - TSS region transcription start site region 111514
Tssr105610 11 108587092 to 108587110 18 + TSS region transcription start site region 105610
Tssr105611 11 108587131 to 108587136 5 + TSS region transcription start site region 105611
Tssr105612 11 108606247 to 108606278 31 + TSS region transcription start site region 105612
Tssr105613 11 108637404 to 108637415 11 + TSS region transcription start site region 105613
Tssr105614 11 108682614 to 108682639 25 + TSS region transcription start site region 105614
Tssr105615 11 108682643 to 108682652 9 + TSS region transcription start site region 105615
Olfr1397-ps1 11 108687077 to 108688035 958 - pseudogene olfactory receptor 1397, pseudogene 1
Ath19 11 108713782 to 108713906 124 QTL atherosclerosis 19
D11Mit333 11 108713782 to 108713906 124 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 333
Pkccl 11 108713782 to 108713906 124 QTL protein kinase C content in lungs
Rpl23a-ps14 11 108716483 to 108716906 423 + pseudogene ribosomal protein L23A, pseudogene 14
Tssr105616 11 108747704 to 108747706 2 + TSS region transcription start site region 105616
Cep112it 11 108820333 to 108826942 6609 + sense intronic lncRNA gene centrosomal protein 112, intronic transcript
Gm36818 11 108826689 to 108855767 29078 - lncRNA gene predicted gene, 36818
Gm46298 11 108864079 to 108912539 48460 - lncRNA gene predicted gene, 46298