Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:107923387-108353888

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkca 11 107933387 to 108343888 410501 - protein coding gene protein kinase C, alpha
Gm10838 11 107966616 to 107970866 4250 unclassified gene predicted gene 10838
Tssr105597 11 107993983 to 107993992 9 + TSS region transcription start site region 105597
Tssr105598 11 107994006 to 107994025 19 + TSS region transcription start site region 105598
Gm11657 11 107994022 to 107994631 609 + antisense lncRNA gene predicted gene 11657
Tssr105599 11 107995405 to 107995411 6 + TSS region transcription start site region 105599
Mir7223 11 107996848 to 107996916 68 + miRNA gene microRNA 7223
Cpgi4044 11 108023124 to 108023462 338 CpG island CpG island 4044
Tssr111491 11 108044678 to 108044683 5 - TSS region transcription start site region 111491
Tssr105600 11 108062349 to 108062351 2 + TSS region transcription start site region 105600
Tssr3708 11 108181832 to 108181865 33 + TSS region transcription start site region 3708
Gm11655 11 108181850 to 108194126 12276 + antisense lncRNA gene predicted gene 11655
Tssr3709 11 108186823 to 108186837 14 + TSS region transcription start site region 3709
Tssr111492 11 108227006 to 108227011 5 - TSS region transcription start site region 111492
Tssr111493 11 108241028 to 108241048 20 - TSS region transcription start site region 111493
Tssr111494 11 108249047 to 108249050 3 - TSS region transcription start site region 111494
Tssr111495 11 108261244 to 108261252 8 - TSS region transcription start site region 111495
Tssr111496 11 108262684 to 108262703 19 - TSS region transcription start site region 111496
Tssr111497 11 108262841 to 108262852 11 - TSS region transcription start site region 111497
Tssr111498 11 108270515 to 108270587 72 - TSS region transcription start site region 111498
Tssr111499 11 108272306 to 108272310 4 - TSS region transcription start site region 111499
Tssr111500 11 108273685 to 108273727 42 - TSS region transcription start site region 111500
Tssr111501 11 108273784 to 108273789 5 - TSS region transcription start site region 111501
Tssr111502 11 108290168 to 108290172 4 - TSS region transcription start site region 111502
Tssr111503 11 108295800 to 108295803 3 - TSS region transcription start site region 111503
Tssr111504 11 108321584 to 108321588 4 - TSS region transcription start site region 111504
Cpgi4045 11 108342835 to 108344435 1600 CpG island CpG island 4045
Tssr111505 11 108343549 to 108343568 19 - TSS region transcription start site region 111505
Tssr111506 11 108343855 to 108343866 11 - TSS region transcription start site region 111506
Tssr111507 11 108343879 to 108343897 18 - TSS region transcription start site region 111507
Tssr111508 11 108343917 to 108343941 24 - TSS region transcription start site region 111508
Tssr111509 11 108343944 to 108343954 10 - TSS region transcription start site region 111509
Tssr111510 11 108344090 to 108344104 14 - TSS region transcription start site region 111510
Tssr111511 11 108344119 to 108344180 61 - TSS region transcription start site region 111511
Gm46297 11 108344359 to 108349578 5219 + lncRNA gene predicted gene, 46297