Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:107893983-108093992

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cacng5	11	107874605 to 107915055	40450	-	protein coding gene	calcium channel, voltage-dependent, gamma subunit 5
Cpgi4043	11	107914658 to 107915357	699		CpG island	CpG island 4043
Tssr111489	11	107915006 to 107915039	33	-	TSS region	transcription start site region 111489
Tssr111490	11	107915041 to 107915069	28	-	TSS region	transcription start site region 111490
Prkca	11	107933387 to 108343888	410501	-	protein coding gene	protein kinase C, alpha
Gm10838	11	107966616 to 107970866	4250		unclassified gene	predicted gene 10838
Tssr105597	11	107993983 to 107993992	9	+	TSS region	transcription start site region 105597
Tssr105598	11	107994006 to 107994025	19	+	TSS region	transcription start site region 105598
Gm11657	11	107994022 to 107994631	609	+	antisense lncRNA gene	predicted gene 11657
Tssr105599	11	107995405 to 107995411	6	+	TSS region	transcription start site region 105599
Mir7223	11	107996848 to 107996916	68	+	miRNA gene	microRNA 7223
Cpgi4044	11	108023124 to 108023462	338		CpG island	CpG island 4044
Tssr111491	11	108044678 to 108044683	5	-	TSS region	transcription start site region 111491
Tssr105600	11	108062349 to 108062351	2	+	TSS region	transcription start site region 105600