Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:107122659-107404101

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bptf 11 107033081 to 107131922 98841 - protein coding gene bromodomain PHD finger transcription factor
Cpgi4035 11 107131128 to 107132741 1613 CpG island CpG island 4035
Tssr111438 11 107131497 to 107131540 43 - TSS region transcription start site region 111438
Tssr111439 11 107131889 to 107131900 11 - TSS region transcription start site region 111439
Tssr111440 11 107131943 to 107131954 11 - TSS region transcription start site region 111440
Tssr111441 11 107132114 to 107132166 52 - TSS region transcription start site region 111441
Tssr111442 11 107132173 to 107132201 28 - TSS region transcription start site region 111442
Tssr111443 11 107132644 to 107132661 17 - TSS region transcription start site region 111443
Tssr111444 11 107137718 to 107137743 25 - TSS region transcription start site region 111444
Tssr105568 11 107137794 to 107137840 46 + TSS region transcription start site region 105568
Gm11715 11 107157408 to 107167125 9717 + antisense lncRNA gene predicted gene 11715
Nol11 11 107166663 to 107189381 22718 - protein coding gene nucleolar protein 11
Rps12-ps26 11 107171900 to 107172232 332 - pseudogene ribosomal protein S12, pseudogene 26
Gm18096 11 107182563 to 107183365 802 + pseudogene predicted gene, 18096
Cpgi4036 11 107188619 to 107189549 930 CpG island CpG island 4036
Tssr111445 11 107189255 to 107189307 52 - TSS region transcription start site region 111445
Tssr111446 11 107189325 to 107189340 15 - TSS region transcription start site region 111446
Gm39425 11 107189431 to 107205839 16408 + lncRNA gene predicted gene, 39425
Tssr105569 11 107189431 to 107189442 11 + TSS region transcription start site region 105569
Gm11718 11 107191094 to 107191630 536 + pseudogene predicted gene 11718
Tssr105570 11 107201916 to 107201930 14 + TSS region transcription start site region 105570
Tssr105571 11 107201972 to 107201983 11 + TSS region transcription start site region 105571
Pitpnc1 11 107207892 to 107470699 262807 - protein coding gene phosphatidylinositol transfer protein, cytoplasmic 1
Tssr111447 11 107212275 to 107212279 4 - TSS region transcription start site region 111447
Tssr111448 11 107213960 to 107213965 5 - TSS region transcription start site region 111448
5830433D23Rik 11 107262659 to 107264101 1442 unclassified gene RIKEN cDNA 5830433D23 gene
Tssr111449 11 107289223 to 107289227 4 - TSS region transcription start site region 111449
Tssr111450 11 107319246 to 107319269 23 - TSS region transcription start site region 111450
Gm11719 11 107330708 to 107331058 350 + pseudogene predicted gene 11719
Tssr105572 11 107335485 to 107335500 15 + TSS region transcription start site region 105572
Tssr105573 11 107335915 to 107335929 14 + TSS region transcription start site region 105573
Tssr105574 11 107335942 to 107335958 16 + TSS region transcription start site region 105574
Tssr105575 11 107336003 to 107336011 8 + TSS region transcription start site region 105575
Tssr111451 11 107337525 to 107337553 28 - TSS region transcription start site region 111451
Tssr111452 11 107337556 to 107337598 42 - TSS region transcription start site region 111452
Tssr111453 11 107337830 to 107337869 39 - TSS region transcription start site region 111453
Tssr111454 11 107337871 to 107337898 27 - TSS region transcription start site region 111454
Tssr105576 11 107337968 to 107337978 10 + TSS region transcription start site region 105576
Tssr105577 11 107337989 to 107338008 19 + TSS region transcription start site region 105577
Tssr105578 11 107338009 to 107338027 18 + TSS region transcription start site region 105578
Tssr105579 11 107338031 to 107338044 13 + TSS region transcription start site region 105579
Gm11716 11 107338050 to 107344804 6754 + antisense lncRNA gene predicted gene 11716
Tssr111455 11 107348152 to 107348179 27 - TSS region transcription start site region 111455
Tssr111456 11 107348195 to 107348213 18 - TSS region transcription start site region 111456
Tssr105580 11 107353136 to 107353145 9 + TSS region transcription start site region 105580
Gm11712 11 107386983 to 107388971 1988 + antisense lncRNA gene predicted gene 11712
Tssr111457 11 107387800 to 107387822 22 - TSS region transcription start site region 111457