Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:106273592-106398288

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4020 11 106272146 to 106273706 1560 CpG island CpG island 4020
Cpgi4021 11 106276371 to 106276911 540 CpG island CpG island 4021
Tssr105511 11 106276651 to 106276688 37 + TSS region transcription start site region 105511
Tcam1 11 106276672 to 106288745 12073 + protein coding gene testicular cell adhesion molecule 1
Tssr105512 11 106276691 to 106276702 11 + TSS region transcription start site region 105512
Tssr105513 11 106276715 to 106276727 12 + TSS region transcription start site region 105513
Tssr105514 11 106300270 to 106300276 6 + TSS region transcription start site region 105514
Gh 11 106300271 to 106301865 1594 - protein coding gene growth hormone
Tssr111314 11 106300303 to 106300372 69 - TSS region transcription start site region 111314
Tssr105515 11 106300305 to 106300336 31 + TSS region transcription start site region 105515
Tssr105516 11 106300338 to 106300368 30 + TSS region transcription start site region 105516
Tssr111315 11 106300374 to 106300396 22 - TSS region transcription start site region 111315
Tssr105517 11 106300387 to 106300390 3 + TSS region transcription start site region 105517
Tssr111316 11 106300400 to 106300409 9 - TSS region transcription start site region 111316
Tssr105518 11 106300410 to 106300439 29 + TSS region transcription start site region 105518
Tssr111317 11 106300440 to 106300443 3 - TSS region transcription start site region 111317
Tssr105519 11 106300470 to 106300525 55 + TSS region transcription start site region 105519
Tssr111318 11 106300473 to 106300478 5 - TSS region transcription start site region 111318
Tssr111319 11 106300500 to 106300518 18 - TSS region transcription start site region 111319
Tssr111320 11 106300528 to 106300566 38 - TSS region transcription start site region 111320
Tssr105520 11 106300775 to 106300779 4 + TSS region transcription start site region 105520
Tssr105521 11 106300780 to 106300803 23 + TSS region transcription start site region 105521
Tssr111321 11 106300810 to 106300811 1 - TSS region transcription start site region 111321
Tssr111322 11 106300815 to 106300820 5 - TSS region transcription start site region 111322
Tssr111323 11 106300822 to 106300842 20 - TSS region transcription start site region 111323
Tssr111324 11 106300844 to 106300890 46 - TSS region transcription start site region 111324
Tssr105522 11 106300847 to 106300854 7 + TSS region transcription start site region 105522
Tssr111325 11 106300896 to 106300929 33 - TSS region transcription start site region 111325
Tssr105523 11 106301103 to 106301134 31 + TSS region transcription start site region 105523
Tssr111326 11 106301123 to 106301162 39 - TSS region transcription start site region 111326
Tssr3705 11 106301165 to 106301168 3 + TSS region transcription start site region 3705
Tssr105524 11 106301169 to 106301187 18 + TSS region transcription start site region 105524
Tssr111327 11 106301177 to 106301193 16 - TSS region transcription start site region 111327
Tssr111328 11 106301200 to 106301216 16 - TSS region transcription start site region 111328
Tssr105525 11 106301383 to 106301409 26 + TSS region transcription start site region 105525
Tssr111329 11 106301426 to 106301427 1 - TSS region transcription start site region 111329
Tssr111330 11 106301435 to 106301460 25 - TSS region transcription start site region 111330
Tssr111331 11 106301469 to 106301518 49 - TSS region transcription start site region 111331
Tssr105526 11 106301470 to 106301477 7 + TSS region transcription start site region 105526
Tssr111332 11 106301528 to 106301539 11 - TSS region transcription start site region 111332
Tssr111333 11 106301547 to 106301561 14 - TSS region transcription start site region 111333
Tssr111334 11 106301801 to 106301816 15 - TSS region transcription start site region 111334
Tssr105527 11 106306030 to 106306040 10 + TSS region transcription start site region 105527
Cd79b 11 106311341 to 106314562 3221 - protein coding gene CD79B antigen
Tssr111335 11 106313707 to 106313738 31 - TSS region transcription start site region 111335
Cpgi4022 11 106314353 to 106314517 164 CpG island CpG island 4022
Tssr111336 11 106314494 to 106314577 83 - TSS region transcription start site region 111336
Scn4a 11 106318592 to 106353288 34696 - protein coding gene sodium channel, voltage-gated, type IV, alpha
Tssr111337 11 106324904 to 106324916 12 - TSS region transcription start site region 111337
Tssr111338 11 106324934 to 106324962 28 - TSS region transcription start site region 111338
Tssr111339 11 106324963 to 106324985 22 - TSS region transcription start site region 111339
Tssr111340 11 106345096 to 106345108 12 - TSS region transcription start site region 111340
Tssr105528 11 106365495 to 106365499 4 + TSS region transcription start site region 105528
Tssr111341 11 106365523 to 106365528 5 - TSS region transcription start site region 111341
Tssr111342 11 106365529 to 106365567 38 - TSS region transcription start site region 111342
Tssr105529 11 106374734 to 106374747 13 + TSS region transcription start site region 105529
Prr29 11 106374760 to 106377114 2354 + protein coding gene proline rich 29
Tssr105530 11 106374799 to 106374807 8 + TSS region transcription start site region 105530
Tssr105531 11 106374820 to 106374832 12 + TSS region transcription start site region 105531
Tssr105532 11 106374835 to 106374850 15 + TSS region transcription start site region 105532
Tssr105533 11 106375300 to 106375316 16 + TSS region transcription start site region 105533
Icam2 11 106377656 to 106388075 10419 - protein coding gene intercellular adhesion molecule 2
Tssr111343 11 106382554 to 106382612 58 - TSS region transcription start site region 111343
Tssr105534 11 106387219 to 106387240 21 + TSS region transcription start site region 105534
Tssr111344 11 106387780 to 106387797 17 - TSS region transcription start site region 111344
Tssr111345 11 106388066 to 106388105 39 - TSS region transcription start site region 111345
Tssr111346 11 106388106 to 106388117 11 - TSS region transcription start site region 111346
Tssr111347 11 106395803 to 106395814 11 - TSS region transcription start site region 111347
Ern1 11 106397620 to 106487796 90176 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 1