Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:106273419-106863433

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189 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4020 11 106272146 to 106273706 1560 CpG island CpG island 4020
Cpgi4021 11 106276371 to 106276911 540 CpG island CpG island 4021
Tssr105511 11 106276651 to 106276688 37 + TSS region transcription start site region 105511
Tcam1 11 106276672 to 106288745 12073 + protein coding gene testicular cell adhesion molecule 1
Tssr105512 11 106276691 to 106276702 11 + TSS region transcription start site region 105512
Tssr105513 11 106276715 to 106276727 12 + TSS region transcription start site region 105513
Tssr105514 11 106300270 to 106300276 6 + TSS region transcription start site region 105514
Gh 11 106300271 to 106301865 1594 - protein coding gene growth hormone
Tssr111314 11 106300303 to 106300372 69 - TSS region transcription start site region 111314
Tssr105515 11 106300305 to 106300336 31 + TSS region transcription start site region 105515
Tssr105516 11 106300338 to 106300368 30 + TSS region transcription start site region 105516
Tssr111315 11 106300374 to 106300396 22 - TSS region transcription start site region 111315
Tssr105517 11 106300387 to 106300390 3 + TSS region transcription start site region 105517
Tssr111316 11 106300400 to 106300409 9 - TSS region transcription start site region 111316
Tssr105518 11 106300410 to 106300439 29 + TSS region transcription start site region 105518
Tssr111317 11 106300440 to 106300443 3 - TSS region transcription start site region 111317
Tssr105519 11 106300470 to 106300525 55 + TSS region transcription start site region 105519
Tssr111318 11 106300473 to 106300478 5 - TSS region transcription start site region 111318
Tssr111319 11 106300500 to 106300518 18 - TSS region transcription start site region 111319
Tssr111320 11 106300528 to 106300566 38 - TSS region transcription start site region 111320
Tssr105520 11 106300775 to 106300779 4 + TSS region transcription start site region 105520
Tssr105521 11 106300780 to 106300803 23 + TSS region transcription start site region 105521
Tssr111321 11 106300810 to 106300811 1 - TSS region transcription start site region 111321
Tssr111322 11 106300815 to 106300820 5 - TSS region transcription start site region 111322
Tssr111323 11 106300822 to 106300842 20 - TSS region transcription start site region 111323
Tssr111324 11 106300844 to 106300890 46 - TSS region transcription start site region 111324
Tssr105522 11 106300847 to 106300854 7 + TSS region transcription start site region 105522
Tssr111325 11 106300896 to 106300929 33 - TSS region transcription start site region 111325
Tssr105523 11 106301103 to 106301134 31 + TSS region transcription start site region 105523
Tssr111326 11 106301123 to 106301162 39 - TSS region transcription start site region 111326
Tssr3705 11 106301165 to 106301168 3 + TSS region transcription start site region 3705
Tssr105524 11 106301169 to 106301187 18 + TSS region transcription start site region 105524
Tssr111327 11 106301177 to 106301193 16 - TSS region transcription start site region 111327
Tssr111328 11 106301200 to 106301216 16 - TSS region transcription start site region 111328
Tssr105525 11 106301383 to 106301409 26 + TSS region transcription start site region 105525
Tssr111329 11 106301426 to 106301427 1 - TSS region transcription start site region 111329
Tssr111330 11 106301435 to 106301460 25 - TSS region transcription start site region 111330
Tssr111331 11 106301469 to 106301518 49 - TSS region transcription start site region 111331
Tssr105526 11 106301470 to 106301477 7 + TSS region transcription start site region 105526
Tssr111332 11 106301528 to 106301539 11 - TSS region transcription start site region 111332
Tssr111333 11 106301547 to 106301561 14 - TSS region transcription start site region 111333
Tssr111334 11 106301801 to 106301816 15 - TSS region transcription start site region 111334
Tssr105527 11 106306030 to 106306040 10 + TSS region transcription start site region 105527
Cd79b 11 106311341 to 106314562 3221 - protein coding gene CD79B antigen
Tssr111335 11 106313707 to 106313738 31 - TSS region transcription start site region 111335
Cpgi4022 11 106314353 to 106314517 164 CpG island CpG island 4022
Tssr111336 11 106314494 to 106314577 83 - TSS region transcription start site region 111336
Scn4a 11 106318592 to 106353288 34696 - protein coding gene sodium channel, voltage-gated, type IV, alpha
Tssr111337 11 106324904 to 106324916 12 - TSS region transcription start site region 111337
Tssr111338 11 106324934 to 106324962 28 - TSS region transcription start site region 111338
Tssr111339 11 106324963 to 106324985 22 - TSS region transcription start site region 111339
Tssr111340 11 106345096 to 106345108 12 - TSS region transcription start site region 111340
Tssr105528 11 106365495 to 106365499 4 + TSS region transcription start site region 105528
Tssr111341 11 106365523 to 106365528 5 - TSS region transcription start site region 111341
Tssr111342 11 106365529 to 106365567 38 - TSS region transcription start site region 111342
Tssr105529 11 106374734 to 106374747 13 + TSS region transcription start site region 105529
Prr29 11 106374760 to 106377114 2354 + protein coding gene proline rich 29
Tssr105530 11 106374799 to 106374807 8 + TSS region transcription start site region 105530
Tssr105531 11 106374820 to 106374832 12 + TSS region transcription start site region 105531
Tssr105532 11 106374835 to 106374850 15 + TSS region transcription start site region 105532
Tssr105533 11 106375300 to 106375316 16 + TSS region transcription start site region 105533
Icam2 11 106377656 to 106388075 10419 - protein coding gene intercellular adhesion molecule 2
Tssr111343 11 106382554 to 106382612 58 - TSS region transcription start site region 111343
Tssr105534 11 106387219 to 106387240 21 + TSS region transcription start site region 105534
Tssr111344 11 106387780 to 106387797 17 - TSS region transcription start site region 111344
Tssr111345 11 106388066 to 106388105 39 - TSS region transcription start site region 111345
Tssr111346 11 106388106 to 106388117 11 - TSS region transcription start site region 111346
Tssr111347 11 106395803 to 106395814 11 - TSS region transcription start site region 111347
Ern1 11 106397620 to 106487796 90176 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 1
Tssr111348 11 106411743 to 106411756 13 - TSS region transcription start site region 111348
Tssr105535 11 106416796 to 106416805 9 + TSS region transcription start site region 105535
Tssr105536 11 106416905 to 106416911 6 + TSS region transcription start site region 105536
Tssr111349 11 106486891 to 106486895 4 - TSS region transcription start site region 111349
Cpgi4023 11 106486922 to 106488366 1444 CpG island CpG island 4023
Tssr111350 11 106487758 to 106487765 7 - TSS region transcription start site region 111350
Tssr111351 11 106487797 to 106487821 24 - TSS region transcription start site region 111351
Tssr111352 11 106487833 to 106487880 47 - TSS region transcription start site region 111352
Tssr111353 11 106488310 to 106488329 19 - TSS region transcription start site region 111353
Tssr111354 11 106488418 to 106488435 17 - TSS region transcription start site region 111354
Cpgi4024 11 106500754 to 106501484 730 CpG island CpG island 4024
Gm36220 11 106500815 to 106501213 398 + lncRNA gene predicted gene, 36220
Tssr105537 11 106500908 to 106500925 17 + TSS region transcription start site region 105537
Snord104 11 106500993 to 106501062 69 + snoRNA gene small nucleolar RNA, C/D box 104
Gm22711 11 106501245 to 106501377 132 + snoRNA gene predicted gene, 22711
Tex2 11 106502147 to 106613423 111276 - protein coding gene testis expressed gene 2
Tssr111355 11 106503299 to 106503303 4 - TSS region transcription start site region 111355
Tssr111356 11 106507068 to 106507106 38 - TSS region transcription start site region 111356
Gm17925 11 106509184 to 106509794 610 + pseudogene predicted gene, 17925
Tssr111357 11 106514237 to 106514241 4 - TSS region transcription start site region 111357
Tssr105538 11 106516369 to 106516379 10 + TSS region transcription start site region 105538
Tssr111358 11 106530097 to 106530121 24 - TSS region transcription start site region 111358
Tssr105539 11 106530375 to 106530380 5 + TSS region transcription start site region 105539
Tssr105540 11 106549625 to 106549626 1 + TSS region transcription start site region 105540
Tssr111359 11 106568419 to 106568433 14 - TSS region transcription start site region 111359
Tssr111360 11 106572182 to 106572200 18 - TSS region transcription start site region 111360
Tssr111361 11 106579074 to 106579087 13 - TSS region transcription start site region 111361
Tssr111362 11 106579093 to 106579105 12 - TSS region transcription start site region 111362
Tssr111363 11 106579111 to 106579141 30 - TSS region transcription start site region 111363
Tssr111364 11 106580594 to 106580609 15 - TSS region transcription start site region 111364
Tssr105541 11 106580697 to 106580716 19 + TSS region transcription start site region 105541
Tssr111365 11 106587937 to 106587948 11 - TSS region transcription start site region 111365
Tssr111366 11 106588870 to 106588881 11 - TSS region transcription start site region 111366
Cpgi4025 11 106612053 to 106613346 1293 CpG island CpG island 4025
Tssr111367 11 106612928 to 106612973 45 - TSS region transcription start site region 111367
Tssr111368 11 106612991 to 106613007 16 - TSS region transcription start site region 111368
Tssr111369 11 106613013 to 106613024 11 - TSS region transcription start site region 111369
Tssr111370 11 106613032 to 106613052 20 - TSS region transcription start site region 111370
Tssr111371 11 106613053 to 106613064 11 - TSS region transcription start site region 111371
Tssr111372 11 106613370 to 106613384 14 - TSS region transcription start site region 111372
Tssr111373 11 106615628 to 106615660 32 - TSS region transcription start site region 111373
Pecam1 11 106654213 to 106750623 96410 - protein coding gene platelet/endothelial cell adhesion molecule 1
Tssr111374 11 106665445 to 106665449 4 - TSS region transcription start site region 111374
Tssr111375 11 106674649 to 106674671 22 - TSS region transcription start site region 111375
Tssr105542 11 106674962 to 106675000 38 + TSS region transcription start site region 105542
Tssr105543 11 106686066 to 106686068 2 + TSS region transcription start site region 105543
Tssr105544 11 106688658 to 106688665 7 + TSS region transcription start site region 105544
Tssr105545 11 106688666 to 106688676 10 + TSS region transcription start site region 105545
Tssr111376 11 106688972 to 106688976 4 - TSS region transcription start site region 111376
Cpgi4026 11 106699329 to 106699778 449 CpG island CpG island 4026
Tssr111377 11 106715059 to 106715073 14 - TSS region transcription start site region 111377
Tssr111378 11 106715076 to 106715099 23 - TSS region transcription start site region 111378
Tssr111379 11 106715203 to 106715214 11 - TSS region transcription start site region 111379
Tssr111380 11 106715236 to 106715247 11 - TSS region transcription start site region 111380
Tssr111381 11 106715251 to 106715293 42 - TSS region transcription start site region 111381
Tssr105546 11 106723223 to 106723239 16 + TSS region transcription start site region 105546
Tssr105547 11 106723253 to 106723268 15 + TSS region transcription start site region 105547
Tssr111382 11 106724421 to 106724434 13 - TSS region transcription start site region 111382
Tssr111383 11 106725264 to 106725270 6 - TSS region transcription start site region 111383
Tssr111384 11 106732544 to 106732557 13 - TSS region transcription start site region 111384
Tssr111385 11 106736411 to 106736441 30 - TSS region transcription start site region 111385
Tssr111386 11 106736448 to 106736466 18 - TSS region transcription start site region 111386
Tssr111387 11 106736475 to 106736486 11 - TSS region transcription start site region 111387
Tssr111388 11 106736499 to 106736506 7 - TSS region transcription start site region 111388
Tssr111389 11 106750185 to 106750202 17 - TSS region transcription start site region 111389
Tssr111390 11 106750273 to 106750346 73 - TSS region transcription start site region 111390
Tssr111391 11 106750472 to 106750486 14 - TSS region transcription start site region 111391
Tssr111392 11 106750649 to 106750660 11 - TSS region transcription start site region 111392
Tssr105548 11 106750675 to 106750690 15 + TSS region transcription start site region 105548
Tssr3706 11 106751104 to 106751120 16 - TSS region transcription start site region 3706
Milr1 11 106751226 to 106768794 17568 + protein coding gene mast cell immunoglobulin like receptor 1
Tssr105549 11 106751242 to 106751251 9 + TSS region transcription start site region 105549
Tssr105550 11 106751255 to 106751280 25 + TSS region transcription start site region 105550
Tssr105551 11 106751609 to 106751647 38 + TSS region transcription start site region 105551
Tssr111393 11 106752208 to 106752223 15 - TSS region transcription start site region 111393
Tssr111394 11 106752227 to 106752238 11 - TSS region transcription start site region 111394
Tssr105552 11 106752461 to 106752472 11 + TSS region transcription start site region 105552
Tssr105553 11 106755115 to 106755135 20 + TSS region transcription start site region 105553
Tssr105554 11 106755148 to 106755184 36 + TSS region transcription start site region 105554
Gm25889 11 106764635 to 106764741 106 - snRNA gene predicted gene, 25889
Polg2 11 106768253 to 106779537 11284 - protein coding gene polymerase (DNA directed), gamma 2, accessory subunit
Tssr111395 11 106775942 to 106775954 12 - TSS region transcription start site region 111395
Tssr111396 11 106778814 to 106778819 5 - TSS region transcription start site region 111396
Cpgi4027 11 106778936 to 106779741 805 CpG island CpG island 4027
Tssr111397 11 106779457 to 106779472 15 - TSS region transcription start site region 111397
Tssr111398 11 106779483 to 106779559 76 - TSS region transcription start site region 111398
Ddx5 11 106780355 to 106789180 8825 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Tssr111399 11 106781884 to 106781899 15 - TSS region transcription start site region 111399
Tssr111400 11 106782112 to 106782117 5 - TSS region transcription start site region 111400
Mir3064 11 106782693 to 106782759 66 - miRNA gene microRNA 3064
Tssr111401 11 106782854 to 106782865 11 - TSS region transcription start site region 111401
Tssr111402 11 106782870 to 106782884 14 - TSS region transcription start site region 111402
Tssr111403 11 106782933 to 106782954 21 - TSS region transcription start site region 111403
Gm25994 11 106783171 to 106783271 100 - miRNA gene predicted gene, 25994
Tssr111404 11 106783343 to 106783362 19 - TSS region transcription start site region 111404
Tssr111405 11 106783949 to 106783969 20 - TSS region transcription start site region 111405
Tssr111406 11 106786718 to 106786767 49 - TSS region transcription start site region 111406
Cpgi4028 11 106787295 to 106789607 2312 CpG island CpG island 4028
Tssr111407 11 106787545 to 106787575 30 - TSS region transcription start site region 111407
Tssr105555 11 106787688 to 106787713 25 + TSS region transcription start site region 105555
Tssr111408 11 106788060 to 106788063 3 - TSS region transcription start site region 111408
Tssr111409 11 106788486 to 106788500 14 - TSS region transcription start site region 111409
Tssr105556 11 106788598 to 106788677 79 + TSS region transcription start site region 105556
Tssr111410 11 106788642 to 106788649 7 - TSS region transcription start site region 111410
Tssr105557 11 106788678 to 106788706 28 + TSS region transcription start site region 105557
Tssr105558 11 106788713 to 106788731 18 + TSS region transcription start site region 105558
Tssr111411 11 106788845 to 106788882 37 - TSS region transcription start site region 111411
Tssr111412 11 106788901 to 106788913 12 - TSS region transcription start site region 111412
Tssr111413 11 106788916 to 106788929 13 - TSS region transcription start site region 111413
Tssr3707 11 106788917 to 106788972 55 + TSS region transcription start site region 3707
Tssr111414 11 106789083 to 106789109 26 - TSS region transcription start site region 111414
Tssr111415 11 106789115 to 106789133 18 - TSS region transcription start site region 111415
Tssr111416 11 106789135 to 106789152 17 - TSS region transcription start site region 111416
Tssr111417 11 106789157 to 106789192 35 - TSS region transcription start site region 111417
Cep95 11 106789226 to 106818861 29635 + protein coding gene centrosomal protein 95
Tssr105559 11 106789235 to 106789335 100 + TSS region transcription start site region 105559
Tssr111418 11 106789436 to 106789454 18 - TSS region transcription start site region 111418
D11Mit290 11 106811877 to 106812051 174 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 290
Gm11706 11 106814670 to 106816008 1338 - antisense lncRNA gene predicted gene 11706
Smurf2 11 106820066 to 106920715 100649 - protein coding gene SMAD specific E3 ubiquitin protein ligase 2