Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:105996061-106143612

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ace3 11 105994675 to 106005443 10768 + protein coding gene angiotensin I converting enzyme (peptidyl-dipeptidase A) 3
Gm35971 11 105995584 to 106020559 24975 - lncRNA gene predicted gene, 35971
Cpgi4010 11 106007917 to 106008227 310 CpG island CpG island 4010
Kcnh6 11 106008124 to 106034549 26425 + protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 6
Tssr105475 11 106008142 to 106008162 20 + TSS region transcription start site region 105475
Cpgi4011 11 106018579 to 106019012 433 CpG island CpG island 4011
Cpgi4012 11 106020065 to 106020841 776 CpG island CpG island 4012
Tssr105476 11 106020115 to 106020167 52 + TSS region transcription start site region 105476
Tssr105477 11 106033584 to 106033602 18 + TSS region transcription start site region 105477
D11Mit201 11 106033620 to 106033812 192 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 201
Cpgi4013 11 106036566 to 106037655 1089 CpG island CpG island 4013
Tssr105478 11 106036857 to 106036866 9 + TSS region transcription start site region 105478
Tssr105479 11 106036867 to 106036924 57 + TSS region transcription start site region 105479
Dcaf7 11 106036872 to 106059324 22452 + protein coding gene DDB1 and CUL4 associated factor 7
Tssr105480 11 106036928 to 106036945 17 + TSS region transcription start site region 105480
Tssr105481 11 106036960 to 106036972 12 + TSS region transcription start site region 105481
D11Mit251 11 106051025 to 106051134 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 251
Gm11646 11 106051151 to 106051852 701 - antisense lncRNA gene predicted gene 11646
Tssr105482 11 106054884 to 106054918 34 + TSS region transcription start site region 105482
Taco1os 11 106065077 to 106066305 1228 - antisense lncRNA gene translational activator of mitochondrially encoded cytochrome c oxidase I, opposite strand
Cpgi4014 11 106065869 to 106066892 1023 CpG island CpG island 4014
Tssr111282 11 106065900 to 106065921 21 - TSS region transcription start site region 111282
Tssr111283 11 106065922 to 106065954 32 - TSS region transcription start site region 111283
Tssr105483 11 106066041 to 106066054 13 + TSS region transcription start site region 105483
Tssr105484 11 106066055 to 106066100 45 + TSS region transcription start site region 105484
Taco1 11 106066061 to 106073612 7551 + protein coding gene translational activator of mitochondrially encoded cytochrome c oxidase I
Tssr3703 11 106066766 to 106066787 21 + TSS region transcription start site region 3703
Cpgi4015 11 106083776 to 106085605 1829 CpG island CpG island 4015
Tssr111284 11 106084144 to 106084157 13 - TSS region transcription start site region 111284
Tssr105485 11 106084545 to 106084559 14 + TSS region transcription start site region 105485
Tssr105486 11 106084577 to 106084623 46 + TSS region transcription start site region 105486
Map3k3 11 106084613 to 106155446 70833 + protein coding gene mitogen-activated protein kinase kinase kinase 3
Tssr105487 11 106085363 to 106085366 3 + TSS region transcription start site region 105487
Tssr105488 11 106090973 to 106091006 33 + TSS region transcription start site region 105488
Tssr105489 11 106096998 to 106097004 6 + TSS region transcription start site region 105489
Tssr111285 11 106098244 to 106098251 7 - TSS region transcription start site region 111285
Tssr105490 11 106113737 to 106113743 6 + TSS region transcription start site region 105490
Gm11672 11 106126336 to 106127351 1015 - antisense lncRNA gene predicted gene 11672
B930069K15Rik 11 106134817 to 106138328 3511 unclassified gene RIKEN cDNA B930069K15 gene
D11Mit147 11 106140852 to 106140945 93 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 147
Tssr105491 11 106142435 to 106142452 17 + TSS region transcription start site region 105491