Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:105173252-105580642

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr105426 11 105178720 to 105178737 17 + TSS region transcription start site region 105426
Tssr105427 11 105178765 to 105178771 6 + TSS region transcription start site region 105427
Tlk2 11 105178807 to 105283959 105152 + protein coding gene tousled-like kinase 2 (Arabidopsis)
1700052K11Rik 11 105179020 to 105181433 2413 - antisense lncRNA gene RIKEN cDNA 1700052K11 gene
Cpgi4000 11 105180560 to 105182465 1905 CpG island CpG island 4000
Tssr111257 11 105181201 to 105181242 41 - TSS region transcription start site region 111257
Tssr111258 11 105181322 to 105181365 43 - TSS region transcription start site region 111258
Tssr111259 11 105181367 to 105181387 20 - TSS region transcription start site region 111259
Tssr105428 11 105181546 to 105181598 52 + TSS region transcription start site region 105428
Tssr105429 11 105181637 to 105181663 26 + TSS region transcription start site region 105429
Tssr105430 11 105181858 to 105181892 34 + TSS region transcription start site region 105430
Tssr105431 11 105190804 to 105190808 4 + TSS region transcription start site region 105431
Tssr105432 11 105240381 to 105240401 20 + TSS region transcription start site region 105432
Tssr105433 11 105244171 to 105244179 8 + TSS region transcription start site region 105433
Tssr111260 11 105291488 to 105291492 4 - TSS region transcription start site region 111260
Cpgi4001 11 105291969 to 105293478 1509 CpG island CpG island 4001
Tssr105434 11 105292111 to 105292153 42 + TSS region transcription start site region 105434
Tssr105435 11 105292622 to 105292629 7 + TSS region transcription start site region 105435
Tssr105436 11 105292637 to 105292669 32 + TSS region transcription start site region 105436
Mrc2 11 105292643 to 105351139 58496 + protein coding gene mannose receptor, C type 2
Tssr105437 11 105292677 to 105292692 15 + TSS region transcription start site region 105437
Tssr105438 11 105292699 to 105292714 15 + TSS region transcription start site region 105438
Tssr105439 11 105304385 to 105304389 4 + TSS region transcription start site region 105439
March10 11 105360798 to 105456735 95937 - protein coding gene membrane-associated ring finger (C3HC4) 10
Cpgi4002 11 105362825 to 105363509 684 CpG island CpG island 4002
Gm11638 11 105363252 to 105390642 27390 + unclassified non-coding RNA gene predicted gene 11638
Tssr111261 11 105406714 to 105406718 4 - TSS region transcription start site region 111261
D11Mit166 11 105421194 to 105421337 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 166
Gm11640 11 105434445 to 105435412 967 + antisense lncRNA gene predicted gene 11640
Gm39417 11 105449701 to 105474551 24850 + lncRNA gene predicted gene, 39417
Tssr105440 11 105452965 to 105452983 18 + TSS region transcription start site region 105440
Tssr111262 11 105455277 to 105455288 11 - TSS region transcription start site region 111262
Tssr111263 11 105455299 to 105455325 26 - TSS region transcription start site region 111263
Cpgi4003 11 105456448 to 105456982 534 CpG island CpG island 4003
Tssr111264 11 105456674 to 105456751 77 - TSS region transcription start site region 111264
Tssr3699 11 105456759 to 105456764 5 - TSS region transcription start site region 3699
Gm35828 11 105504266 to 105517449 13183 + lncRNA gene predicted gene, 35828
Gm39419 11 105517480 to 105519850 2370 + lncRNA gene predicted gene, 39419
Gm39422 11 105552757 to 105577590 24833 + lncRNA gene predicted gene, 39422