Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:104631209-105159110

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itgb3 11 104608000 to 104670476 62476 + protein coding gene integrin beta 3
Tssr105413 11 104632275 to 104632310 35 + TSS region transcription start site region 105413
Tssr105414 11 104633575 to 104633615 40 + TSS region transcription start site region 105414
Cpgi3995 11 104637075 to 104637339 264 CpG island CpG island 3995
Tssr111255 11 104637213 to 104637229 16 - TSS region transcription start site region 111255
Tssr105415 11 104637349 to 104637365 16 + TSS region transcription start site region 105415
Tssr105416 11 104637393 to 104637402 9 + TSS region transcription start site region 105416
Tssr105417 11 104637540 to 104637547 7 + TSS region transcription start site region 105417
Tssr3698 11 104637553 to 104637563 10 + TSS region transcription start site region 3698
Gm11662 11 104679105 to 104680655 1550 - pseudogene predicted gene 11662
Cpgi3996 11 104685491 to 104685990 499 CpG island CpG island 3996
Tssr105418 11 104685701 to 104685714 13 + TSS region transcription start site region 105418
Tssr105419 11 104685737 to 104685746 9 + TSS region transcription start site region 105419
Efcab13 11 104690834 to 104779911 89077 + protein coding gene EF-hand calcium binding domain 13
Gm11639 11 104781209 to 105009110 227901 + protein coding gene predicted gene 11639
Gm11623 11 104814416 to 104815640 1224 + pseudogene predicted gene 11623
Gm11621 11 104928216 to 104928801 585 + pseudogene predicted gene 11621
Gm11622 11 105031157 to 105031847 690 + pseudogene predicted gene 11622
Gm11624 11 105033034 to 105034074 1040 - pseudogene predicted gene 11624
Efcab3 11 105063592 to 105117537 53945 + protein coding gene EF-hand calcium binding domain 3
Gm25362 11 105081628 to 105081732 104 + snRNA gene predicted gene, 25362
Tssr105420 11 105091860 to 105091884 24 + TSS region transcription start site region 105420
Tssr105421 11 105092194 to 105092201 7 + TSS region transcription start site region 105421
Tssr105422 11 105092213 to 105092244 31 + TSS region transcription start site region 105422
Cpgi3997 11 105112440 to 105112759 319 CpG island CpG island 3997
Cpgi3998 11 105126051 to 105127144 1093 CpG island CpG island 3998
Tssr111256 11 105126299 to 105126341 42 - TSS region transcription start site region 111256
Mettl2 11 105126425 to 105140394 13969 + protein coding gene methyltransferase like 2
Tssr105423 11 105126467 to 105126519 52 + TSS region transcription start site region 105423
Gm24290 11 105141214 to 105141309 95 + unclassified non-coding RNA gene predicted gene, 24290
Gm10842 11 105146893 to 105147261 368 + protein coding gene predicted gene 10842
Tssr105424 11 105156945 to 105156956 11 + TSS region transcription start site region 105424