Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:104590834-104879911

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr105409	11	104607776 to 104607812	36	+	TSS region	transcription start site region 105409
Cpgi3994	11	104607786 to 104608689	903		CpG island	CpG island 3994
Itgb3	11	104608000 to 104670476	62476	+	protein coding gene	integrin beta 3
Tssr105410	11	104608000 to 104608012	12	+	TSS region	transcription start site region 105410
Tssr105411	11	104608026 to 104608037	11	+	TSS region	transcription start site region 105411
Tssr105412	11	104608040 to 104608063	23	+	TSS region	transcription start site region 105412
D11Mit10	11	104611774 to 104611872	98		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 10
Hbnr14	11	104611774 to 104611872	98		QTL	Heligmosomoides bakeri nematode resistance 14
T2dm5sa	11	104611872 to 79922933	-24688939		QTL	type 2 diabetes mellitus 5 in SMXA RI mice
Tssr105413	11	104632275 to 104632310	35	+	TSS region	transcription start site region 105413
Tssr105414	11	104633575 to 104633615	40	+	TSS region	transcription start site region 105414
Cpgi3995	11	104637075 to 104637339	264		CpG island	CpG island 3995
Tssr111255	11	104637213 to 104637229	16	-	TSS region	transcription start site region 111255
Tssr105415	11	104637349 to 104637365	16	+	TSS region	transcription start site region 105415
Tssr105416	11	104637393 to 104637402	9	+	TSS region	transcription start site region 105416
Tssr105417	11	104637540 to 104637547	7	+	TSS region	transcription start site region 105417
Tssr3698	11	104637553 to 104637563	10	+	TSS region	transcription start site region 3698
Gm11662	11	104679105 to 104680655	1550	-	pseudogene	predicted gene 11662
Cpgi3996	11	104685491 to 104685990	499		CpG island	CpG island 3996
Tssr105418	11	104685701 to 104685714	13	+	TSS region	transcription start site region 105418
Tssr105419	11	104685737 to 104685746	9	+	TSS region	transcription start site region 105419
Efcab13	11	104690834 to 104779911	89077	+	protein coding gene	EF-hand calcium binding domain 13
Gm11639	11	104781209 to 105009110	227901	+	protein coding gene	predicted gene 11639
Gm11623	11	104814416 to 104815640	1224	+	pseudogene	predicted gene 11623