Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:104583575-104683615

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myl4 11 104550529 to 104587219 36690 + protein coding gene myosin, light polypeptide 4
Tssr105407 11 104584295 to 104584310 15 + TSS region transcription start site region 105407
Tssr105408 11 104586282 to 104586296 14 + TSS region transcription start site region 105408
Tssr105409 11 104607776 to 104607812 36 + TSS region transcription start site region 105409
Cpgi3994 11 104607786 to 104608689 903 CpG island CpG island 3994
Itgb3 11 104608000 to 104670476 62476 + protein coding gene integrin beta 3
Tssr105410 11 104608000 to 104608012 12 + TSS region transcription start site region 105410
Tssr105411 11 104608026 to 104608037 11 + TSS region transcription start site region 105411
Tssr105412 11 104608040 to 104608063 23 + TSS region transcription start site region 105412
D11Mit10 11 104611774 to 104611872 98 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 10
Hbnr14 11 104611774 to 104611872 98 QTL Heligmosomoides bakeri nematode resistance 14
T2dm5sa 11 104611872 to 79922933 -24688939 QTL type 2 diabetes mellitus 5 in SMXA RI mice
Tssr105413 11 104632275 to 104632310 35 + TSS region transcription start site region 105413
Tssr105414 11 104633575 to 104633615 40 + TSS region transcription start site region 105414
Cpgi3995 11 104637075 to 104637339 264 CpG island CpG island 3995
Tssr111255 11 104637213 to 104637229 16 - TSS region transcription start site region 111255
Tssr105415 11 104637349 to 104637365 16 + TSS region transcription start site region 105415
Tssr105416 11 104637393 to 104637402 9 + TSS region transcription start site region 105416
Tssr105417 11 104637540 to 104637547 7 + TSS region transcription start site region 105417
Tssr3698 11 104637553 to 104637563 10 + TSS region transcription start site region 3698
Gm11662 11 104679105 to 104680655 1550 - pseudogene predicted gene 11662