Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:103677364-103799821

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gosr2	11	103676849 to 103697738	20889	-	protein coding gene	golgi SNAP receptor complex member 2
Tssr111211	11	103686760 to 103686770	10	-	TSS region	transcription start site region 111211
Tssr111212	11	103686837 to 103686848	11	-	TSS region	transcription start site region 111212
Tssr111213	11	103692445 to 103692453	8	-	TSS region	transcription start site region 111213
Tssr111214	11	103697061 to 103697063	2	-	TSS region	transcription start site region 111214
Tssr105355	11	103697321 to 103697340	19	+	TSS region	transcription start site region 105355
Cpgi3972	11	103697333 to 103698223	890		CpG island	CpG island 3972
Tssr111215	11	103697661 to 103697718	57	-	TSS region	transcription start site region 111215
Tssr105356	11	103697711 to 103697780	69	+	TSS region	transcription start site region 105356
Tssr111216	11	103697723 to 103697734	11	-	TSS region	transcription start site region 111216
C130046K22Rik	11	103697724 to 103722832	25108	+	lncRNA gene	RIKEN cDNA C130046K22 gene
Tssr111217	11	103697779 to 103697790	11	-	TSS region	transcription start site region 111217
Tssr111218	11	103697937 to 103697948	11	-	TSS region	transcription start site region 111218
Tssr111219	11	103698036 to 103698045	9	-	TSS region	transcription start site region 111219
Gm11642	11	103723950 to 103724532	582	+	unclassified non-coding RNA gene	predicted gene 11642
Wnt9b	11	103727364 to 103749821	22457	-	protein coding gene	wingless-type MMTV integration site family, member 9B
Cpgi3973	11	103730580 to 103731197	617		CpG island	CpG island 3973
Cpgi3974	11	103749297 to 103750352	1055		CpG island	CpG island 3974
Tssr111220	11	103749815 to 103749829	14	-	TSS region	transcription start site region 111220
Cpgi3975	11	103773403 to 103774541	1138		CpG island	CpG island 3975
Wnt3	11	103774150 to 103817957	43807	+	protein coding gene	wingless-type MMTV integration site family, member 3
Tssr105357	11	103774165 to 103774193	28	+	TSS region	transcription start site region 105357
Cpgi3976	11	103795156 to 103795837	681		CpG island	CpG island 3976