Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:103454577-103701140

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc37a 11 103451955 to 103504597 52642 - protein coding gene leucine rich repeat containing 37A
Tssr111198 11 103504893 to 103504903 10 - TSS region transcription start site region 111198
Tssr111199 11 103504917 to 103504928 11 - TSS region transcription start site region 111199
Tssr111200 11 103504929 to 103504937 8 - TSS region transcription start site region 111200
Tssr111201 11 103504955 to 103504966 11 - TSS region transcription start site region 111201
4930467D19Rik 11 103505281 to 103506958 1677 unclassified gene RIKEN cDNA 4930467D19 gene
Gm884 11 103534577 to 103621140 86563 - protein coding gene predicted gene 884
Tssr111202 11 103567880 to 103567881 1 - TSS region transcription start site region 111202
Gm11643 11 103600242 to 103601105 863 - pseudogene predicted gene 11643
Tssr3691 11 103621413 to 103621416 3 - TSS region transcription start site region 3691
Tssr111203 11 103621422 to 103621442 20 - TSS region transcription start site region 111203
Cpgi3970 11 103627454 to 103627804 350 CpG island CpG island 3970
Tssr111204 11 103627642 to 103627656 14 - TSS region transcription start site region 111204
Tssr111205 11 103627657 to 103627669 12 - TSS region transcription start site region 111205
Gm39504 11 103629191 to 103629707 516 - protein coding gene predicted gene, 39504
Lyzl6 11 103631070 to 103638890 7820 - protein coding gene lysozyme-like 6
Tssr111206 11 103638839 to 103638850 11 - TSS region transcription start site region 111206
Tssr111207 11 103638852 to 103638861 9 - TSS region transcription start site region 111207
Tssr111208 11 103638862 to 103638893 31 - TSS region transcription start site region 111208
Tssr111209 11 103638899 to 103638906 7 - TSS region transcription start site region 111209
Tssr105346 11 103638919 to 103638931 12 + TSS region transcription start site region 105346
1700072I22Rik 11 103638936 to 103649013 10077 + lncRNA gene RIKEN cDNA 1700072I22 gene
Tssr105347 11 103638950 to 103638955 5 + TSS region transcription start site region 105347
Tssr105348 11 103638978 to 103638985 7 + TSS region transcription start site region 105348
Cpgi3971 11 103649117 to 103650678 1561 CpG island CpG island 3971
Tssr105349 11 103649498 to 103649521 23 + TSS region transcription start site region 105349
Tssr105350 11 103649530 to 103649557 27 + TSS region transcription start site region 105350
Tssr105351 11 103649569 to 103649574 5 + TSS region transcription start site region 105351
Rprml 11 103649570 to 103650579 1009 + protein coding gene reprimo-like
Tssr105352 11 103649578 to 103649585 7 + TSS region transcription start site region 105352
Tssr105353 11 103649640 to 103649649 9 + TSS region transcription start site region 105353
Tssr105354 11 103649700 to 103649714 14 + TSS region transcription start site region 105354
Tssr111210 11 103652662 to 103652666 4 - TSS region transcription start site region 111210
Gosr2 11 103676849 to 103697738 20889 - protein coding gene golgi SNAP receptor complex member 2
Tssr111211 11 103686760 to 103686770 10 - TSS region transcription start site region 111211
Tssr111212 11 103686837 to 103686848 11 - TSS region transcription start site region 111212
Tssr111213 11 103692445 to 103692453 8 - TSS region transcription start site region 111213
Tssr111214 11 103697061 to 103697063 2 - TSS region transcription start site region 111214
Tssr105355 11 103697321 to 103697340 19 + TSS region transcription start site region 105355
Cpgi3972 11 103697333 to 103698223 890 CpG island CpG island 3972
Tssr111215 11 103697661 to 103697718 57 - TSS region transcription start site region 111215
Tssr105356 11 103697711 to 103697780 69 + TSS region transcription start site region 105356
Tssr111216 11 103697723 to 103697734 11 - TSS region transcription start site region 111216
C130046K22Rik 11 103697724 to 103722832 25108 + lncRNA gene RIKEN cDNA C130046K22 gene
Tssr111217 11 103697779 to 103697790 11 - TSS region transcription start site region 111217
Tssr111218 11 103697937 to 103697948 11 - TSS region transcription start site region 111218
Tssr111219 11 103698036 to 103698045 9 - TSS region transcription start site region 111219