Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 11:103188127-103238432

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32 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fmnl1 11 103171107 to 103198901 27794 + protein coding gene formin-like 1
Gm20511 11 103190710 to 103192896 2186 - lncRNA gene predicted gene 20511
Cpgi3958 11 103192358 to 103193428 1070 CpG island CpG island 3958
Tssr105325 11 103192397 to 103192435 38 + TSS region transcription start site region 105325
Tssr105326 11 103192617 to 103192690 73 + TSS region transcription start site region 105326
Tssr105327 11 103192694 to 103192704 10 + TSS region transcription start site region 105327
Tssr105328 11 103192705 to 103192712 7 + TSS region transcription start site region 105328
Tssr105329 11 103193072 to 103193084 12 + TSS region transcription start site region 105329
Tssr105330 11 103193100 to 103193113 13 + TSS region transcription start site region 105330
Tssr105331 11 103193131 to 103193142 11 + TSS region transcription start site region 105331
Tssr111158 11 103193524 to 103193540 16 - TSS region transcription start site region 111158
Tssr105332 11 103193605 to 103193651 46 + TSS region transcription start site region 105332
Tssr105333 11 103197650 to 103197661 11 + TSS region transcription start site region 105333
Tssr105334 11 103197677 to 103197687 10 + TSS region transcription start site region 105334
Cpgi3959 11 103198388 to 103200045 1657 CpG island CpG island 3959
Efcab15 11 103198943 to 103208548 9605 - protein coding gene EF-hand calcium binding domain 15
Tssr111159 11 103199441 to 103199465 24 - TSS region transcription start site region 111159
Tssr111160 11 103199478 to 103199503 25 - TSS region transcription start site region 111160
Tssr111161 11 103199712 to 103199747 35 - TSS region transcription start site region 111161
Tssr111162 11 103201763 to 103201786 23 - TSS region transcription start site region 111162
Spata32 11 103208127 to 103218432 10305 - protein coding gene spermatogenesis associated 32
Tssr111163 11 103208531 to 103208534 3 - TSS region transcription start site region 111163
Tssr111164 11 103208542 to 103208555 13 - TSS region transcription start site region 111164
Tssr111165 11 103208565 to 103208566 1 - TSS region transcription start site region 111165
Gm51920 11 103208637 to 103217188 8551 + lincRNA gene predicted gene, 51920
Tssr105335 11 103208652 to 103208663 11 + TSS region transcription start site region 105335
Cpgi3960 11 103217710 to 103218520 810 CpG island CpG island 3960
Tssr111166 11 103218421 to 103218438 17 - TSS region transcription start site region 111166
Tssr111167 11 103218450 to 103218461 11 - TSS region transcription start site region 111167
Gm34823 11 103218610 to 103238761 20151 + lncRNA gene predicted gene, 34823
Map3k14 11 103219764 to 103267401 47637 - protein coding gene mitogen-activated protein kinase kinase kinase 14
Tssr111168 11 103237875 to 103237912 37 - TSS region transcription start site region 111168