Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102893864-103034132

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfap 11 102887336 to 102897200 9864 - protein coding gene glial fibrillary acidic protein
Cpgi3941 11 102892994 to 102893873 879 CpG island CpG island 3941
Tssr111118 11 102894534 to 102894543 9 - TSS region transcription start site region 111118
D11Nds7 11 102894911 to 102895067 156 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 7
Bolt 11 102894911 to 113919427 11024516 heritable phenotypic marker lightning bolt tail
Tssr111119 11 102895920 to 102895939 19 - TSS region transcription start site region 111119
Tssr111120 11 102895970 to 102895982 12 - TSS region transcription start site region 111120
Cpgi3942 11 102896729 to 102897138 409 CpG island CpG island 3942
Tssr105293 11 102896760 to 102896769 9 + TSS region transcription start site region 105293
Tssr111121 11 102897123 to 102897139 16 - TSS region transcription start site region 111121
Tssr111122 11 102897146 to 102897157 11 - TSS region transcription start site region 111122
Gm34560 11 102897656 to 102904476 6820 + lncRNA gene predicted gene, 34560
Gm39395 11 102900037 to 102900821 784 - lncRNA gene predicted gene, 39395
Kif18b 11 102905529 to 102925124 19595 - protein coding gene kinesin family member 18B
Tssr3687 11 102916185 to 102916189 4 - TSS region transcription start site region 3687
Cpgi3943 11 102924638 to 102925419 781 CpG island CpG island 3943
Tssr111123 11 102925051 to 102925064 13 - TSS region transcription start site region 111123
Tssr111124 11 102925086 to 102925130 44 - TSS region transcription start site region 111124
Tssr105294 11 102925272 to 102925288 16 + TSS region transcription start site region 105294
Tssr105295 11 102925599 to 102925644 45 + TSS region transcription start site region 105295
C1ql1 11 102939264 to 102946461 7197 - protein coding gene complement component 1, q subcomponent-like 1
Cpgi3944 11 102945274 to 102947194 1920 CpG island CpG island 3944
Tssr111125 11 102946011 to 102946056 45 - TSS region transcription start site region 111125
Tssr111126 11 102946548 to 102946568 20 - TSS region transcription start site region 111126
Tssr111127 11 102946701 to 102946725 24 - TSS region transcription start site region 111127
Tssr111128 11 102946741 to 102946751 10 - TSS region transcription start site region 111128
Tssr111129 11 102946769 to 102946778 9 - TSS region transcription start site region 111129
Cpgi3945 11 102948296 to 102948968 672 CpG island CpG island 3945
2410004I01Rik 11 102958300 to 102964154 5854 - lincRNA gene RIKEN cDNA 2410004I01 gene
Cpgi3946 11 102963864 to 102964132 268 CpG island CpG island 3946
Cpgi3947 11 102989666 to 102990688 1022 CpG island CpG island 3947
Gm34620 11 102989944 to 102995757 5813 + lncRNA gene predicted gene, 34620
Dcakd 11 102994047 to 103028239 34192 - protein coding gene dephospho-CoA kinase domain containing
Tssr111130 11 102994310 to 102994328 18 - TSS region transcription start site region 111130
Tssr111131 11 102994674 to 102994695 21 - TSS region transcription start site region 111131
Tssr111132 11 102994704 to 102994735 31 - TSS region transcription start site region 111132
Tssr111133 11 102994879 to 102994915 36 - TSS region transcription start site region 111133
Tssr111134 11 102994949 to 102994966 17 - TSS region transcription start site region 111134
Tssr111135 11 102995005 to 102995041 36 - TSS region transcription start site region 111135
Tssr111136 11 102997405 to 102997444 39 - TSS region transcription start site region 111136
Tssr111137 11 102997525 to 102997542 17 - TSS region transcription start site region 111137
Tssr111138 11 102997556 to 102997568 12 - TSS region transcription start site region 111138
Tssr111139 11 102997586 to 102997597 11 - TSS region transcription start site region 111139
Tssr111140 11 102997601 to 102997618 17 - TSS region transcription start site region 111140
Gm9778 11 102999108 to 103000650 1542 protein coding gene predicted gene 9778
Tssr111141 11 102999796 to 102999810 14 - TSS region transcription start site region 111141
Tssr111142 11 102999828 to 102999840 12 - TSS region transcription start site region 111142
Tssr111143 11 102999843 to 102999854 11 - TSS region transcription start site region 111143
Mir6931 11 102999848 to 102999921 73 - miRNA gene microRNA 6931
Tssr111144 11 103001891 to 103001895 4 - TSS region transcription start site region 111144
Cpgi3948 11 103016579 to 103017453 874 CpG island CpG island 3948
Tssr111145 11 103017073 to 103017152 79 - TSS region transcription start site region 111145
Tssr111146 11 103017167 to 103017179 12 - TSS region transcription start site region 111146
Tssr111147 11 103018711 to 103018716 5 - TSS region transcription start site region 111147
Tssr105296 11 103027844 to 103027862 18 + TSS region transcription start site region 105296
Cpgi3949 11 103028173 to 103028830 657 CpG island CpG island 3949
Tssr111148 11 103028188 to 103028203 15 - TSS region transcription start site region 111148
Tssr111149 11 103028204 to 103028291 87 - TSS region transcription start site region 111149
Tssr105297 11 103028327 to 103028368 41 + TSS region transcription start site region 105297
Tssr111150 11 103028328 to 103028340 12 - TSS region transcription start site region 111150
Nmt1 11 103028344 to 103066111 37767 + protein coding gene N-myristoyltransferase 1
Tssr111151 11 103028345 to 103028364 19 - TSS region transcription start site region 111151
Tssr105298 11 103028542 to 103028573 31 + TSS region transcription start site region 105298