MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:102619128-102699925

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
2810433D01Rik	11	102619796 to 102624416	4620	-	lincRNA gene	RIKEN cDNA 2810433D01 gene
Cpgi3931	11	102625203 to 102625518	315		CpG island	CpG island 3931
Tssr3686	11	102653140 to 102653145	5	+	TSS region	transcription start site region 3686
Psmb5-ps	11	102659128 to 102659925	797	-	pseudogene	proteasome (prosome, macropain) subunit, beta type 5, pseudogene
Cpgi3932	11	102659561 to 102659803	242		CpG island	CpG island 3932
Gm22920	11	102659572 to 102659680	108	-	miRNA gene	predicted gene, 22920
Meioc	11	102664966 to 102682240	17274	+	protein coding gene	meiosis specific with coiled-coil domain
1700052M18Rik	11	102664967 to 102665247	280		unclassified gene	RIKEN cDNA 1700052M18 gene
Cpgi3933	11	102665111 to 102666486	1375		CpG island	CpG island 3933
Tssr105279	11	102665534 to 102665560	26	+	TSS region	transcription start site region 105279
Tssr105280	11	102665566 to 102665595	29	+	TSS region	transcription start site region 105280
Tssr105281	11	102665612 to 102665633	21	+	TSS region	transcription start site region 105281
Tssr111098	11	102666007 to 102666017	10	-	TSS region	transcription start site region 111098
Ccdc43	11	102684686 to 102697782	13096	-	protein coding gene	coiled-coil domain containing 43
Tssr111099	11	102688108 to 102688112	4	-	TSS region	transcription start site region 111099
Cpgi3934	11	102697437 to 102698040	603		CpG island	CpG island 3934
Tssr111100	11	102697710 to 102697757	47	-	TSS region	transcription start site region 111100
Gm34392	11	102697779 to 102698214	435	+	lncRNA gene	predicted gene, 34392