Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102614966-102732240

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11636 11 102614892 to 102616546 1654 - lincRNA gene predicted gene 11636
2810433D01Rik 11 102619796 to 102624416 4620 - lincRNA gene RIKEN cDNA 2810433D01 gene
Cpgi3931 11 102625203 to 102625518 315 CpG island CpG island 3931
Tssr3686 11 102653140 to 102653145 5 + TSS region transcription start site region 3686
Psmb5-ps 11 102659128 to 102659925 797 - pseudogene proteasome (prosome, macropain) subunit, beta type 5, pseudogene
Cpgi3932 11 102659561 to 102659803 242 CpG island CpG island 3932
Gm22920 11 102659572 to 102659680 108 - miRNA gene predicted gene, 22920
Meioc 11 102664966 to 102682240 17274 + protein coding gene meiosis specific with coiled-coil domain
1700052M18Rik 11 102664967 to 102665247 280 unclassified gene RIKEN cDNA 1700052M18 gene
Cpgi3933 11 102665111 to 102666486 1375 CpG island CpG island 3933
Tssr105279 11 102665534 to 102665560 26 + TSS region transcription start site region 105279
Tssr105280 11 102665566 to 102665595 29 + TSS region transcription start site region 105280
Tssr105281 11 102665612 to 102665633 21 + TSS region transcription start site region 105281
Tssr111098 11 102666007 to 102666017 10 - TSS region transcription start site region 111098
Ccdc43 11 102684686 to 102697782 13096 - protein coding gene coiled-coil domain containing 43
Tssr111099 11 102688108 to 102688112 4 - TSS region transcription start site region 111099
Cpgi3934 11 102697437 to 102698040 603 CpG island CpG island 3934
Tssr111100 11 102697710 to 102697757 47 - TSS region transcription start site region 111100
Gm34392 11 102697779 to 102698214 435 + lncRNA gene predicted gene, 34392
Tssr105282 11 102710343 to 102710345 2 + TSS region transcription start site region 105282
Gm39501 11 102726811 to 102752979 26168 + protein coding gene predicted gene, 39501
Gm11637 11 102731245 to 102731775 530 - pseudogene predicted gene 11637