Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102544610-102664621

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpatch8 11 102475911 to 102556192 80281 - protein coding gene G patch domain containing 8
Mdk-ps1 11 102545702 to 102546022 320 + pseudogene midkine pseudogene 1
Gm25337 11 102549196 to 102549299 103 - snRNA gene predicted gene, 25337
Tssr111093 11 102553029 to 102553033 4 - TSS region transcription start site region 111093
Tssr111094 11 102553222 to 102553226 4 - TSS region transcription start site region 111094
Cpgi3928 11 102555633 to 102556569 936 CpG island CpG island 3928
Tssr111095 11 102556122 to 102556171 49 - TSS region transcription start site region 111095
Tssr105269 11 102556495 to 102556513 18 + TSS region transcription start site region 105269
Gm11627 11 102576399 to 102579119 2720 - protein coding gene predicted gene 11627
Cpgi3929 11 102578712 to 102579069 357 CpG island CpG island 3929
Tssr111096 11 102579071 to 102579083 12 - TSS region transcription start site region 111096
Tssr111097 11 102579516 to 102579538 22 - TSS region transcription start site region 111097
Cpgi3930 11 102604305 to 102606476 2171 CpG island CpG island 3930
Tssr105270 11 102604370 to 102604435 65 + TSS region transcription start site region 105270
Fzd2 11 102604431 to 102608058 3627 + protein coding gene frizzled class receptor 2
Tssr105271 11 102604454 to 102604478 24 + TSS region transcription start site region 105271
Tssr105272 11 102604519 to 102604532 13 + TSS region transcription start site region 105272
Tssr105273 11 102604610 to 102604621 11 + TSS region transcription start site region 105273
Tssr105274 11 102604755 to 102604792 37 + TSS region transcription start site region 105274
Tssr105275 11 102604823 to 102604836 13 + TSS region transcription start site region 105275
Tssr105276 11 102605976 to 102606004 28 + TSS region transcription start site region 105276
Tssr105277 11 102606244 to 102606254 10 + TSS region transcription start site region 105277
Tssr105278 11 102606898 to 102606905 7 + TSS region transcription start site region 105278
Gm11636 11 102614892 to 102616546 1654 - lincRNA gene predicted gene 11636
2810433D01Rik 11 102619796 to 102624416 4620 - lincRNA gene RIKEN cDNA 2810433D01 gene
Cpgi3931 11 102625203 to 102625518 315 CpG island CpG island 3931
Tssr3686 11 102653140 to 102653145 5 + TSS region transcription start site region 3686
Psmb5-ps 11 102659128 to 102659925 797 - pseudogene proteasome (prosome, macropain) subunit, beta type 5, pseudogene
Cpgi3932 11 102659561 to 102659803 242 CpG island CpG island 3932
Gm22920 11 102659572 to 102659680 108 - miRNA gene predicted gene, 22920