Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102435702-102656022

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grn 11 102430322 to 102436809 6487 + protein coding gene granulin
Tssr105259 11 102435704 to 102435727 23 + TSS region transcription start site region 105259
Tssr105260 11 102435741 to 102435756 15 + TSS region transcription start site region 105260
Tssr105261 11 102435795 to 102435864 69 + TSS region transcription start site region 105261
Tssr105262 11 102435880 to 102435895 15 + TSS region transcription start site region 105262
Tssr105263 11 102436040 to 102436052 12 + TSS region transcription start site region 105263
Tssr105264 11 102436099 to 102436150 51 + TSS region transcription start site region 105264
Tssr111078 11 102436162 to 102436197 35 - TSS region transcription start site region 111078
Tssr105265 11 102436164 to 102436189 25 + TSS region transcription start site region 105265
Tssr105266 11 102436369 to 102436380 11 + TSS region transcription start site region 105266
Tssr105267 11 102436475 to 102436484 9 + TSS region transcription start site region 105267
Tssr105268 11 102436520 to 102436534 14 + TSS region transcription start site region 105268
Tssr111079 11 102436803 to 102436807 4 - TSS region transcription start site region 111079
Fam171a2 11 102436981 to 102447674 10693 - protein coding gene family with sequence similarity 171, member A2
Cpgi3923 11 102437047 to 102438945 1898 CpG island CpG island 3923
Tssr3685 11 102440615 to 102440618 3 + TSS region transcription start site region 3685
Tssr111080 11 102444796 to 102444803 7 - TSS region transcription start site region 111080
Cpgi3924 11 102446695 to 102448156 1461 CpG island CpG island 3924
Tssr111081 11 102447597 to 102447610 13 - TSS region transcription start site region 111081
Tssr111082 11 102447612 to 102447642 30 - TSS region transcription start site region 111082
Tssr111083 11 102447647 to 102447677 30 - TSS region transcription start site region 111083
Pbd1 11 102453297 to 112493297 10040000 QTL peak bone density 1
Itga2b 11 102453297 to 102469883 16586 - protein coding gene integrin alpha 2b
Cpgi3925 11 102455729 to 102456460 731 CpG island CpG island 3925
Gm23563 11 102458724 to 102458974 250 - unclassified non-coding RNA gene predicted gene, 23563
Cpgi3926 11 102465677 to 102465923 246 CpG island CpG island 3926
Cpgi3927 11 102467068 to 102467634 566 CpG island CpG island 3927
Tssr111084 11 102469734 to 102469752 18 - TSS region transcription start site region 111084
Tssr111085 11 102469839 to 102469866 27 - TSS region transcription start site region 111085
Tssr111086 11 102470101 to 102470110 9 - TSS region transcription start site region 111086
Tssr111087 11 102470144 to 102470165 21 - TSS region transcription start site region 111087
Gpatch8 11 102475911 to 102556192 80281 - protein coding gene G patch domain containing 8
Tssr111088 11 102476580 to 102476587 7 - TSS region transcription start site region 111088
Tssr111089 11 102478505 to 102478546 41 - TSS region transcription start site region 111089
Tssr111090 11 102480774 to 102480788 14 - TSS region transcription start site region 111090
Tssr111091 11 102481062 to 102481073 11 - TSS region transcription start site region 111091
Tssr111092 11 102481082 to 102481097 15 - TSS region transcription start site region 111092
Gm11628 11 102492439 to 102492609 170 - pseudogene predicted gene 11628
Mdk-ps1 11 102545702 to 102546022 320 + pseudogene midkine pseudogene 1
Gm25337 11 102549196 to 102549299 103 - snRNA gene predicted gene, 25337
Tssr111093 11 102553029 to 102553033 4 - TSS region transcription start site region 111093
Tssr111094 11 102553222 to 102553226 4 - TSS region transcription start site region 111094
Cpgi3928 11 102555633 to 102556569 936 CpG island CpG island 3928
Tssr111095 11 102556122 to 102556171 49 - TSS region transcription start site region 111095
Tssr105269 11 102556495 to 102556513 18 + TSS region transcription start site region 105269
Gm11627 11 102576399 to 102579119 2720 - protein coding gene predicted gene 11627
Cpgi3929 11 102578712 to 102579069 357 CpG island CpG island 3929
Tssr111096 11 102579071 to 102579083 12 - TSS region transcription start site region 111096
Tssr111097 11 102579516 to 102579538 22 - TSS region transcription start site region 111097
Cpgi3930 11 102604305 to 102606476 2171 CpG island CpG island 3930
Tssr105270 11 102604370 to 102604435 65 + TSS region transcription start site region 105270
Fzd2 11 102604431 to 102608058 3627 + protein coding gene frizzled class receptor 2
Tssr105271 11 102604454 to 102604478 24 + TSS region transcription start site region 105271
Tssr105272 11 102604519 to 102604532 13 + TSS region transcription start site region 105272
Tssr105273 11 102604610 to 102604621 11 + TSS region transcription start site region 105273
Tssr105274 11 102604755 to 102604792 37 + TSS region transcription start site region 105274
Tssr105275 11 102604823 to 102604836 13 + TSS region transcription start site region 105275
Tssr105276 11 102605976 to 102606004 28 + TSS region transcription start site region 105276
Tssr105277 11 102606244 to 102606254 10 + TSS region transcription start site region 105277
Tssr105278 11 102606898 to 102606905 7 + TSS region transcription start site region 105278
Gm11636 11 102614892 to 102616546 1654 - lincRNA gene predicted gene 11636
2810433D01Rik 11 102619796 to 102624416 4620 - lincRNA gene RIKEN cDNA 2810433D01 gene
Cpgi3931 11 102625203 to 102625518 315 CpG island CpG island 3931
Tssr3686 11 102653140 to 102653145 5 + TSS region transcription start site region 3686