Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102363521-102423542

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc4a1 11 102348820 to 102365281 16461 - protein coding gene solute carrier family 4 (anion exchanger), member 1
Tssr111061 11 102363692 to 102363704 12 - TSS region transcription start site region 111061
Tssr111062 11 102365111 to 102365168 57 - TSS region transcription start site region 111062
Tssr3684 11 102365173 to 102365178 5 - TSS region transcription start site region 3684
Bloodlinc 11 102375551 to 102377020 1469 - lincRNA gene Bloodlinc, erythroid developmental long intergenic non-protein coding transcript
Cpgi3918 11 102375679 to 102375960 281 CpG island CpG island 3918
Gm34253 11 102376044 to 102381581 5537 + lncRNA gene predicted gene, 34253
Cpgi3919 11 102393054 to 102393945 891 CpG island CpG island 3919
Rundc3a 11 102393403 to 102402555 9152 + protein coding gene RUN domain containing 3A
Tssr105217 11 102393419 to 102393496 77 + TSS region transcription start site region 105217
Tssr105218 11 102393521 to 102393542 21 + TSS region transcription start site region 105218
Tssr105219 11 102393551 to 102393562 11 + TSS region transcription start site region 105219
Tssr105220 11 102393582 to 102393589 7 + TSS region transcription start site region 105220
Cpgi3920 11 102399249 to 102400233 984 CpG island CpG island 3920
Tssr105221 11 102399815 to 102399826 11 + TSS region transcription start site region 105221
Tssr105222 11 102399829 to 102399842 13 + TSS region transcription start site region 105222
Slc25a39 11 102402985 to 102407946 4961 - protein coding gene solute carrier family 25, member 39
Tssr111063 11 102403282 to 102403296 14 - TSS region transcription start site region 111063
Mir6930 11 102404920 to 102404987 67 - miRNA gene microRNA 6930
Tssr111064 11 102406609 to 102406622 13 - TSS region transcription start site region 111064
Tssr111065 11 102406742 to 102406752 10 - TSS region transcription start site region 111065
Tssr111066 11 102406766 to 102406782 16 - TSS region transcription start site region 111066
Tssr111067 11 102406783 to 102406828 45 - TSS region transcription start site region 111067
Cpgi3921 11 102406972 to 102408114 1142 CpG island CpG island 3921
Tssr111068 11 102407437 to 102407448 11 - TSS region transcription start site region 111068
Tssr111069 11 102407455 to 102407528 73 - TSS region transcription start site region 111069
Tssr105223 11 102407613 to 102407632 19 + TSS region transcription start site region 105223
Tssr105224 11 102407719 to 102407733 14 + TSS region transcription start site region 105224
Tssr111070 11 102407857 to 102407895 38 - TSS region transcription start site region 111070
Tssr111071 11 102407899 to 102407913 14 - TSS region transcription start site region 111071
Tssr111072 11 102407922 to 102407951 29 - TSS region transcription start site region 111072
Cpgi3922 11 102408292 to 102408811 519 CpG island CpG island 3922
Tssr111073 11 102408457 to 102408473 16 - TSS region transcription start site region 111073