Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102245469-102345474

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3911 11 102245043 to 102245515 472 CpG island CpG island 3911
Cpgi3912 11 102248749 to 102249301 552 CpG island CpG island 3912
Tssr105199 11 102248842 to 102248888 46 + TSS region transcription start site region 105199
BC030867 11 102248882 to 102265187 16305 + protein coding gene cDNA sequence BC030867
Tssr105200 11 102248891 to 102248937 46 + TSS region transcription start site region 105200
Tssr105201 11 102262221 to 102262230 9 + TSS region transcription start site region 105201
Tssr105202 11 102262240 to 102262252 12 + TSS region transcription start site region 105202
Tssr105203 11 102268732 to 102268761 29 + TSS region transcription start site region 105203
Tssr105204 11 102268769 to 102268778 9 + TSS region transcription start site region 105204
Tssr105205 11 102268779 to 102268788 9 + TSS region transcription start site region 105205
Asb16 11 102268823 to 102278061 9238 + protein coding gene ankyrin repeat and SOCS box-containing 16
Cpgi3913 11 102276323 to 102276910 587 CpG island CpG island 3913
Tssr105206 11 102276657 to 102276689 32 + TSS region transcription start site region 105206
Tssr105207 11 102276805 to 102276833 28 + TSS region transcription start site region 105207
Cpgi3914 11 102284568 to 102285548 980 CpG island CpG island 3914
Tmub2 11 102284931 to 102289237 4306 + protein coding gene transmembrane and ubiquitin-like domain containing 2
Tssr105208 11 102284932 to 102285033 101 + TSS region transcription start site region 105208
Tssr105209 11 102285161 to 102285251 90 + TSS region transcription start site region 105209
Atxn7l3 11 102289300 to 102296631 7331 - protein coding gene ataxin 7-like 3
Tssr105210 11 102295469 to 102295474 5 + TSS region transcription start site region 105210
Cpgi3915 11 102295618 to 102297878 2260 CpG island CpG island 3915
Tssr111019 11 102296256 to 102296316 60 - TSS region transcription start site region 111019
Tssr111020 11 102296618 to 102296681 63 - TSS region transcription start site region 111020
Tssr111021 11 102296751 to 102296812 61 - TSS region transcription start site region 111021
Gm33851 11 102296813 to 102297917 1104 + lncRNA gene predicted gene, 33851
Tssr111022 11 102296981 to 102296998 17 - TSS region transcription start site region 111022
Ubtf 11 102304560 to 102319742 15182 - protein coding gene upstream binding transcription factor, RNA polymerase I
Tssr111023 11 102306047 to 102306070 23 - TSS region transcription start site region 111023
Cpgi3916 11 102308867 to 102309492 625 CpG island CpG island 3916
Tssr105211 11 102309259 to 102309275 16 + TSS region transcription start site region 105211
Tssr105212 11 102309289 to 102309309 20 + TSS region transcription start site region 105212
Cpgi3917 11 102316349 to 102320727 4378 CpG island CpG island 3917
Tssr111024 11 102316607 to 102316646 39 - TSS region transcription start site region 111024
Tssr111025 11 102316660 to 102316678 18 - TSS region transcription start site region 111025
Tssr111026 11 102316691 to 102316708 17 - TSS region transcription start site region 111026
Tssr105213 11 102316848 to 102316859 11 + TSS region transcription start site region 105213
Tssr105214 11 102316874 to 102316969 95 + TSS region transcription start site region 105214
Tssr105215 11 102317004 to 102317015 11 + TSS region transcription start site region 105215
Tssr111027 11 102317623 to 102317642 19 - TSS region transcription start site region 111027
Tssr111028 11 102317760 to 102317785 25 - TSS region transcription start site region 111028
Tssr111029 11 102317787 to 102317816 29 - TSS region transcription start site region 111029
Tssr111030 11 102317860 to 102317877 17 - TSS region transcription start site region 111030
Tssr111031 11 102318036 to 102318061 25 - TSS region transcription start site region 111031
Tssr111032 11 102318941 to 102319004 63 - TSS region transcription start site region 111032
Tssr111033 11 102319093 to 102319105 12 - TSS region transcription start site region 111033
Tssr111034 11 102319342 to 102319349 7 - TSS region transcription start site region 111034
Tssr111035 11 102319382 to 102319446 64 - TSS region transcription start site region 111035
C030013E06Rik 11 102319788 to 102320242 454 unclassified gene RIKEN cDNA C030013E06 gene
Tssr111036 11 102319825 to 102319859 34 - TSS region transcription start site region 111036
Tssr111037 11 102320265 to 102320278 13 - TSS region transcription start site region 111037