Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102139733-102310098

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3904 11 102145334 to 102148104 2770 CpG island CpG island 3904
Tssr105186 11 102145467 to 102145470 3 + TSS region transcription start site region 105186
Tssr105187 11 102145473 to 102145501 28 + TSS region transcription start site region 105187
Nags 11 102145513 to 102149477 3964 + protein coding gene N-acetylglutamate synthase
Tssr105188 11 102145530 to 102145541 11 + TSS region transcription start site region 105188
Gm11586 11 102145549 to 102146246 697 - antisense lncRNA gene predicted gene 11586
Tssr111002 11 102146240 to 102146260 20 - TSS region transcription start site region 111002
Tssr105189 11 102146339 to 102146383 44 + TSS region transcription start site region 105189
Tmem101 11 102152546 to 102156404 3858 - protein coding gene transmembrane protein 101
Cpgi3905 11 102155640 to 102156469 829 CpG island CpG island 3905
Tssr111003 11 102156339 to 102156414 75 - TSS region transcription start site region 111003
Lsm12 11 102162497 to 102185296 22799 - protein coding gene LSM12 homolog
Tssr111004 11 102162646 to 102162650 4 - TSS region transcription start site region 111004
Tssr111005 11 102163148 to 102163171 23 - TSS region transcription start site region 111005
Tssr111006 11 102163553 to 102163557 4 - TSS region transcription start site region 111006
Tssr111007 11 102163601 to 102163632 31 - TSS region transcription start site region 111007
Tssr105190 11 102163852 to 102163855 3 + TSS region transcription start site region 105190
Tssr111008 11 102164015 to 102164061 46 - TSS region transcription start site region 111008
Tssr111009 11 102167199 to 102167223 24 - TSS region transcription start site region 111009
Tssr111010 11 102177718 to 102177721 3 - TSS region transcription start site region 111010
Cpgi3906 11 102184513 to 102185431 918 CpG island CpG island 3906
Tssr111011 11 102185202 to 102185238 36 - TSS region transcription start site region 111011
Tssr111012 11 102185239 to 102185316 77 - TSS region transcription start site region 111012
Tssr105191 11 102185380 to 102185398 18 + TSS region transcription start site region 105191
Cpgi3907 11 102189465 to 102190101 636 CpG island CpG island 3907
Tssr105192 11 102189651 to 102189734 83 + TSS region transcription start site region 105192
G6pc3 11 102189699 to 102194081 4382 + protein coding gene glucose 6 phosphatase, catalytic, 3
Tssr105193 11 102189770 to 102189791 21 + TSS region transcription start site region 105193
Tssr105194 11 102189810 to 102189833 23 + TSS region transcription start site region 105194
Tssr105195 11 102189840 to 102189870 30 + TSS region transcription start site region 105195
Tssr105196 11 102192357 to 102192384 27 + TSS region transcription start site region 105196
Hdac5 11 102194432 to 102230166 35734 - protein coding gene histone deacetylase 5
Tssr111013 11 102216665 to 102216669 4 - TSS region transcription start site region 111013
Tssr105197 11 102216761 to 102216804 43 + TSS region transcription start site region 105197
Cpgi3908 11 102218493 to 102218784 291 CpG island CpG island 3908
Tssr111014 11 102218823 to 102218851 28 - TSS region transcription start site region 111014
Tssr111015 11 102218923 to 102218935 12 - TSS region transcription start site region 111015
Cpgi3909 11 102224733 to 102225098 365 CpG island CpG island 3909
Tssr111016 11 102224773 to 102224821 48 - TSS region transcription start site region 111016
Cpgi3910 11 102229480 to 102230535 1055 CpG island CpG island 3910
Mir8101 11 102230040 to 102230150 110 - miRNA gene microRNA 8101
Tssr111017 11 102230091 to 102230122 31 - TSS region transcription start site region 111017
Tssr111018 11 102230127 to 102230166 39 - TSS region transcription start site region 111018
Cpgi3911 11 102245043 to 102245515 472 CpG island CpG island 3911
Tssr105198 11 102245377 to 102245415 38 + TSS region transcription start site region 105198
Cpgi3912 11 102248749 to 102249301 552 CpG island CpG island 3912
Tssr105199 11 102248842 to 102248888 46 + TSS region transcription start site region 105199
BC030867 11 102248882 to 102265187 16305 + protein coding gene cDNA sequence BC030867
Tssr105200 11 102248891 to 102248937 46 + TSS region transcription start site region 105200
Tssr105201 11 102262221 to 102262230 9 + TSS region transcription start site region 105201
Tssr105202 11 102262240 to 102262252 12 + TSS region transcription start site region 105202
Tssr105203 11 102268732 to 102268761 29 + TSS region transcription start site region 105203
Tssr105204 11 102268769 to 102268778 9 + TSS region transcription start site region 105204
Tssr105205 11 102268779 to 102268788 9 + TSS region transcription start site region 105205
Asb16 11 102268823 to 102278061 9238 + protein coding gene ankyrin repeat and SOCS box-containing 16
Cpgi3913 11 102276323 to 102276910 587 CpG island CpG island 3913
Tssr105206 11 102276657 to 102276689 32 + TSS region transcription start site region 105206
Tssr105207 11 102276805 to 102276833 28 + TSS region transcription start site region 105207
Cpgi3914 11 102284568 to 102285548 980 CpG island CpG island 3914
Tmub2 11 102284931 to 102289237 4306 + protein coding gene transmembrane and ubiquitin-like domain containing 2
Tssr105208 11 102284932 to 102285033 101 + TSS region transcription start site region 105208
Tssr105209 11 102285161 to 102285251 90 + TSS region transcription start site region 105209
Atxn7l3 11 102289300 to 102296631 7331 - protein coding gene ataxin 7-like 3
Tssr105210 11 102295469 to 102295474 5 + TSS region transcription start site region 105210
Cpgi3915 11 102295618 to 102297878 2260 CpG island CpG island 3915
Tssr111019 11 102296256 to 102296316 60 - TSS region transcription start site region 111019
Tssr111020 11 102296618 to 102296681 63 - TSS region transcription start site region 111020
Tssr111021 11 102296751 to 102296812 61 - TSS region transcription start site region 111021
Gm33851 11 102296813 to 102297917 1104 + lncRNA gene predicted gene, 33851
Tssr111022 11 102296981 to 102296998 17 - TSS region transcription start site region 111022
Ubtf 11 102304560 to 102319742 15182 - protein coding gene upstream binding transcription factor, RNA polymerase I
Tssr111023 11 102306047 to 102306070 23 - TSS region transcription start site region 111023
Cpgi3916 11 102308867 to 102309492 625 CpG island CpG island 3916
Tssr105211 11 102309259 to 102309275 16 + TSS region transcription start site region 105211
Tssr105212 11 102309289 to 102309309 20 + TSS region transcription start site region 105212