Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102097646-102227650

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr105185 11 102097845 to 102097849 4 + TSS region transcription start site region 105185
Tssr110998 11 102097880 to 102097910 30 - TSS region transcription start site region 110998
Tssr110999 11 102097968 to 102097985 17 - TSS region transcription start site region 110999
Ppy 11 102099931 to 102101300 1369 - protein coding gene pancreatic polypeptide
D11Kyo1 11 102100321 to 102100538 217 DNA segment DNA segment, Chr 11, Kyoto University 1
Tssr111000 11 102101317 to 102101321 4 - TSS region transcription start site region 111000
Pyy 11 102106676 to 102107832 1156 - protein coding gene peptide YY
Cpgi3902 11 102106953 to 102107821 868 CpG island CpG island 3902
Tssr111001 11 102107823 to 102107838 15 - TSS region transcription start site region 111001
Gm11584 11 102113249 to 102113573 324 - pseudogene predicted gene 11584
Gm39394 11 102122924 to 102134593 11669 + lncRNA gene predicted gene, 39394
Gm11585 11 102124072 to 102124640 568 + pseudogene predicted gene 11585
Cpgi3903 11 102138373 to 102138763 390 CpG island CpG island 3903
Cpgi3904 11 102145334 to 102148104 2770 CpG island CpG island 3904
Tssr105186 11 102145467 to 102145470 3 + TSS region transcription start site region 105186
Tssr105187 11 102145473 to 102145501 28 + TSS region transcription start site region 105187
Nags 11 102145513 to 102149477 3964 + protein coding gene N-acetylglutamate synthase
Tssr105188 11 102145530 to 102145541 11 + TSS region transcription start site region 105188
Gm11586 11 102145549 to 102146246 697 - antisense lncRNA gene predicted gene 11586
Tssr111002 11 102146240 to 102146260 20 - TSS region transcription start site region 111002
Tssr105189 11 102146339 to 102146383 44 + TSS region transcription start site region 105189
Tmem101 11 102152546 to 102156404 3858 - protein coding gene transmembrane protein 101
Cpgi3905 11 102155640 to 102156469 829 CpG island CpG island 3905
Tssr111003 11 102156339 to 102156414 75 - TSS region transcription start site region 111003
Lsm12 11 102162497 to 102185296 22799 - protein coding gene LSM12 homolog
Tssr111004 11 102162646 to 102162650 4 - TSS region transcription start site region 111004
Tssr111005 11 102163148 to 102163171 23 - TSS region transcription start site region 111005
Tssr111006 11 102163553 to 102163557 4 - TSS region transcription start site region 111006
Tssr111007 11 102163601 to 102163632 31 - TSS region transcription start site region 111007
Tssr105190 11 102163852 to 102163855 3 + TSS region transcription start site region 105190
Tssr111008 11 102164015 to 102164061 46 - TSS region transcription start site region 111008
Tssr111009 11 102167199 to 102167223 24 - TSS region transcription start site region 111009
Tssr111010 11 102177718 to 102177721 3 - TSS region transcription start site region 111010
Cpgi3906 11 102184513 to 102185431 918 CpG island CpG island 3906
Tssr111011 11 102185202 to 102185238 36 - TSS region transcription start site region 111011
Tssr111012 11 102185239 to 102185316 77 - TSS region transcription start site region 111012
Tssr105191 11 102185380 to 102185398 18 + TSS region transcription start site region 105191
Cpgi3907 11 102189465 to 102190101 636 CpG island CpG island 3907
Tssr105192 11 102189651 to 102189734 83 + TSS region transcription start site region 105192
G6pc3 11 102189699 to 102194081 4382 + protein coding gene glucose 6 phosphatase, catalytic, 3
Tssr105193 11 102189770 to 102189791 21 + TSS region transcription start site region 105193
Tssr105194 11 102189810 to 102189833 23 + TSS region transcription start site region 105194
Tssr105195 11 102189840 to 102189870 30 + TSS region transcription start site region 105195
Tssr105196 11 102192357 to 102192384 27 + TSS region transcription start site region 105196
Hdac5 11 102194432 to 102230166 35734 - protein coding gene histone deacetylase 5
Tssr111013 11 102216665 to 102216669 4 - TSS region transcription start site region 111013
Tssr105197 11 102216761 to 102216804 43 + TSS region transcription start site region 105197
Cpgi3908 11 102218493 to 102218784 291 CpG island CpG island 3908
Tssr111014 11 102218823 to 102218851 28 - TSS region transcription start site region 111014
Tssr111015 11 102218923 to 102218935 12 - TSS region transcription start site region 111015
Cpgi3909 11 102224733 to 102225098 365 CpG island CpG island 3909
Tssr111016 11 102224773 to 102224821 48 - TSS region transcription start site region 111016