Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101993146-102093182

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mpp3	11	101999652 to 102027045	27393	-	protein coding gene	membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
Cpgi3895	11	102026288 to 102027420	1132		CpG island	CpG island 3895
Tssr110985	11	102026878 to 102026902	24	-	TSS region	transcription start site region 110985
Tssr110986	11	102026924 to 102026962	38	-	TSS region	transcription start site region 110986
E130111B04Rik	11	102030268 to 102035084	4816	-	antisense lncRNA gene	RIKEN cDNA E130111B04 gene
Tssr105173	11	102041501 to 102041506	5	+	TSS region	transcription start site region 105173
Cd300lg	11	102041511 to 102055617	14106	+	protein coding gene	CD300 molecule like family member G
Tssr105174	11	102041520 to 102041531	11	+	TSS region	transcription start site region 105174
Tssr105175	11	102041532 to 102041581	49	+	TSS region	transcription start site region 105175
Tssr105176	11	102043146 to 102043182	36	+	TSS region	transcription start site region 105176
Gm39393	11	102049346 to 102052918	3572	-	lncRNA gene	predicted gene, 39393
Tssr105177	11	102050171 to 102050192	21	+	TSS region	transcription start site region 105177
Tssr110987	11	102051684 to 102051706	22	-	TSS region	transcription start site region 110987
Mpp2	11	102057015 to 102088515	31500	-	protein coding gene	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
Cpgi3896	11	102060699 to 102060968	269		CpG island	CpG island 3896
Cpgi3897	11	102061441 to 102061618	177		CpG island	CpG island 3897
Cpgi3898	11	102082342 to 102082517	175		CpG island	CpG island 3898
Tssr110988	11	102082464 to 102082493	29	-	TSS region	transcription start site region 110988
Cpgi3899	11	102087078 to 102087760	682		CpG island	CpG island 3899
Cpgi3900	11	102088056 to 102088830	774		CpG island	CpG island 3900
Tssr110989	11	102088439 to 102088470	31	-	TSS region	transcription start site region 110989
Tssr110990	11	102088471 to 102088530	59	-	TSS region	transcription start site region 110990
Tssr110991	11	102088540 to 102088554	14	-	TSS region	transcription start site region 110991