Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101814355-101974372

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3887 11 101870022 to 101870434 412 CpG island CpG island 3887
Meox1 11 101877510 to 101894354 16844 - protein coding gene mesenchyme homeobox 1
Cpgi3888 11 101881671 to 101882065 394 CpG island CpG island 3888
Gm11551 11 101886237 to 101891206 4969 + antisense lncRNA gene predicted gene 11551
D11Mit199 11 101887768 to 101887910 142 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 199
Tssr110975 11 101893699 to 101893780 81 - TSS region transcription start site region 110975
Tssr110976 11 101894355 to 101894372 17 - TSS region transcription start site region 110976
Tssr110977 11 101894396 to 101894401 5 - TSS region transcription start site region 110977
Cpgi3889 11 101928053 to 101928312 259 CpG island CpG island 3889
Gm33662 11 101929194 to 101938528 9334 - lncRNA gene predicted gene, 33662
Tssr105164 11 101936673 to 101936685 12 + TSS region transcription start site region 105164
Cpgi3890 11 101936959 to 101937661 702 CpG island CpG island 3890
Rpl27-ps2 11 101939501 to 101939899 398 + pseudogene ribosomal protein L27, pseudogene 2
D11Mit332 11 101940796 to 101940916 120 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 332
D11Mit146 11 101942438 to 101942579 141 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 146
Cpgi3891 11 101949407 to 101949563 156 CpG island CpG island 3891
4930417O22Rik 11 101952421 to 101960573 8152 + antisense lncRNA gene RIKEN cDNA 4930417O22 gene
Sost 11 101962458 to 101967015 4557 - protein coding gene sclerostin
Cpgi3892 11 101963254 to 101964459 1205 CpG island CpG island 3892
Tssr110978 11 101967005 to 101967021 16 - TSS region transcription start site region 110978
Dusp3 11 101971141 to 101987005 15864 - protein coding gene dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
Gm20659 11 101971143 to 101971859 716 + antisense lncRNA gene predicted gene 20659
Tssr110979 11 101972942 to 101972959 17 - TSS region transcription start site region 110979
Tssr110980 11 101973959 to 101974009 50 - TSS region transcription start site region 110980