Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101571256-101711510

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nbr1 11 101552149 to 101581951 29802 + protein coding gene NBR1, autophagy cargo receptor
Tssr105141 11 101582236 to 101582312 76 + TSS region transcription start site region 105141
Tmem106a 11 101582242 to 101591788 9546 + protein coding gene transmembrane protein 106A
Tssr105142 11 101583416 to 101583476 60 + TSS region transcription start site region 105142
Tssr105143 11 101583484 to 101583494 10 + TSS region transcription start site region 105143
Tssr105144 11 101583573 to 101583593 20 + TSS region transcription start site region 105144
Tssr105145 11 101583611 to 101583630 19 + TSS region transcription start site region 105145
Tssr105146 11 101583722 to 101583733 11 + TSS region transcription start site region 105146
Tssr105147 11 101584437 to 101584477 40 + TSS region transcription start site region 105147
Tssr105148 11 101586232 to 101586322 90 + TSS region transcription start site region 105148
Tssr105149 11 101587915 to 101587964 49 + TSS region transcription start site region 105149
Tssr105150 11 101588906 to 101588924 18 + TSS region transcription start site region 105150
Tssr110954 11 101591782 to 101591786 4 - TSS region transcription start site region 110954
Gm11634 11 101593743 to 101599256 5513 - protein coding gene predicted gene 11634
Tssr3678 11 101593981 to 101593987 6 - TSS region transcription start site region 3678
Tssr110955 11 101599229 to 101599255 26 - TSS region transcription start site region 110955
Tssr110956 11 101599260 to 101599271 11 - TSS region transcription start site region 110956
Cpgi3876 11 101604558 to 101604848 290 CpG island CpG island 3876
Gm26316 11 101604850 to 101605040 190 + snRNA gene predicted gene, 26316
Cpgi3877 11 101610578 to 101610769 191 CpG island CpG island 3877
Gm11635 11 101610614 to 101615956 5342 + lincRNA gene predicted gene 11635
Tssr105151 11 101610648 to 101610662 14 + TSS region transcription start site region 105151
Tssr105152 11 101610686 to 101610693 7 + TSS region transcription start site region 105152
D11Nds2 11 101626367 to 101626505 138 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 2
Cpgi3878 11 101626897 to 101627337 440 CpG island CpG island 3878
Tssr110957 11 101626941 to 101626943 2 - TSS region transcription start site region 110957
Rdm1 11 101627242 to 101636089 8847 + protein coding gene RAD52 motif 1
Gm23849 11 101627366 to 101627556 190 + snRNA gene predicted gene, 23849
Cpgi3879 11 101627894 to 101628484 590 CpG island CpG island 3879
Tssr105153 11 101627943 to 101627972 29 + TSS region transcription start site region 105153
Tssr105154 11 101640046 to 101640051 5 + TSS region transcription start site region 105154
Cpgi3880 11 101641256 to 101641510 254 CpG island CpG island 3880
Gm24950 11 101641748 to 101641938 190 + snRNA gene predicted gene, 24950
Tssr105155 11 101642783 to 101642788 5 + TSS region transcription start site region 105155
Gm23971 11 101645740 to 101645930 190 - snRNA gene predicted gene, 23971
Cpgi3881 11 101646034 to 101646268 234 CpG island CpG island 3881
Cpgi3882 11 101657942 to 101658202 260 CpG island CpG island 3882
Rnu2-10 11 101658238 to 101658424 186 + snRNA gene U2 small nuclear RNA 10
Cpgi3883 11 101665284 to 101665963 679 CpG island CpG island 3883
Arl4d 11 101665541 to 101667832 2291 + protein coding gene ADP-ribosylation factor-like 4D
Tssr105156 11 101665554 to 101665572 18 + TSS region transcription start site region 105156
Tssr110958 11 101675465 to 101675496 31 - TSS region transcription start site region 110958
Tssr105157 11 101682857 to 101682869 12 + TSS region transcription start site region 105157
Gm39391 11 101696251 to 101697580 1329 + lncRNA gene predicted gene, 39391