Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101258590-101299510

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps25 11 101253707 to 101259549 5842 + protein coding gene vacuolar protein sorting 25
Tssr105067 11 101259155 to 101259177 22 + TSS region transcription start site region 105067
Tssr105068 11 101259219 to 101259248 29 + TSS region transcription start site region 105068
Cpgi3861 11 101260190 to 101261268 1078 CpG island CpG island 3861
Tssr105069 11 101260549 to 101260560 11 + TSS region transcription start site region 105069
Wnk4 11 101260567 to 101277409 16842 + protein coding gene WNK lysine deficient protein kinase 4
Tssr105070 11 101260569 to 101260622 53 + TSS region transcription start site region 105070
Cpgi3862 11 101262558 to 101262909 351 CpG island CpG island 3862
Cpgi3863 11 101263688 to 101264062 374 CpG island CpG island 3863
Gm11615 11 101264762 to 101266303 1541 - antisense lncRNA gene predicted gene 11615
Cpgi3864 11 101264960 to 101265577 617 CpG island CpG island 3864
Tssr105071 11 101268779 to 101268785 6 + TSS region transcription start site region 105071
Cpgi3865 11 101276520 to 101276722 202 CpG island CpG island 3865
Coa3 11 101277970 to 101278948 978 - protein coding gene cytochrome C oxidase assembly factor 3
Cpgi3866 11 101278590 to 101279510 920 CpG island CpG island 3866
Tssr110921 11 101278927 to 101278969 42 - TSS region transcription start site region 110921
Tssr105072 11 101279092 to 101279111 19 + TSS region transcription start site region 105072
Tssr105073 11 101279112 to 101279147 35 + TSS region transcription start site region 105073
Tssr105074 11 101279157 to 101279188 31 + TSS region transcription start site region 105074
Cntd1 11 101279203 to 101288701 9498 + protein coding gene cyclin N-terminal domain containing 1
Becn1 11 101288262 to 101302290 14028 - protein coding gene beclin 1, autophagy related